* CPV: sci-chemistry/tinker-6.0 * REPO: gentoo * USE: elibc_glibc kernel_linux test userland_GNU x86 * You need one of these Fortran Compilers: gfortran ifc * Installed are: gfortran ifort >>> Unpacking source... >>> Unpacking tinker-6.0.tar.gz to /var/tmp/portage/sci-chemistry/tinker-6.0/work >>> Source unpacked in /var/tmp/portage/sci-chemistry/tinker-6.0/work >>> Preparing source in /var/tmp/portage/sci-chemistry/tinker-6.0/work/tinker/source ... >>> Source prepared. >>> Configuring source in /var/tmp/portage/sci-chemistry/tinker-6.0/work/tinker/source ... >>> Source configured. >>> Compiling source in /var/tmp/portage/sci-chemistry/tinker-6.0/work/tinker/source ... Package apbs was not found in the pkg-config search path. Perhaps you should add the directory containing `apbs.pc' to the PKG_CONFIG_PATH environment variable No package 'apbs' found make -j14 -f ../make/Makefile F77=gfortran 'CC=i686-pc-linux-gnu-gcc -c' F77FLAGS=-c 'OPTFLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,-rpath /opt/icedtea6-bin-1.8.0/jre/lib/i386/server/' 'INCLUDEDIR=-I/etc/java-config-2/current-system-vm/include -I/etc/java-config-2/current-system-vm/include/linux -I/usr/include' 'LIBS= -lmaloc -L/opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -ljvm' gfortran -c -O2 -pipe alchemy.f gfortran -c -O2 -pipe active.f gfortran -c -O2 -pipe analysis.f gfortran -c -O2 -pipe analyze.f gfortran -c -O2 -pipe angles.f gfortran -c -O2 -pipe anneal.f gfortran -c -O2 -pipe archive.f gfortran -c -O2 -pipe attach.f gfortran -c -O2 -pipe basefile.f gfortran -c -O2 -pipe beeman.f gfortran -c -O2 -pipe bicubic.f gfortran -c -O2 -pipe bitors.f gfortran -c -O2 -pipe bonds.f gfortran -c -O2 -pipe born.f gfortran -c -O2 -pipe bounds.f gfortran -c -O2 -pipe bspline.f gfortran -c -O2 -pipe calendar.f gfortran -c -O2 -pipe center.f gfortran -c -O2 -pipe chkpole.f gfortran -c -O2 -pipe chkring.f gfortran -c -O2 -pipe chkxyz.f gfortran -c -O2 -pipe cholesky.f gfortran -c -O2 -pipe clock.f gfortran -c -O2 -pipe cluster.f gfortran -c -O2 -pipe column.f gfortran -c -O2 -pipe command.f gfortran -c -O2 -pipe connect.f gfortran -c -O2 -pipe connolly.f gfortran -c -O2 -pipe control.f gfortran -c -O2 -pipe correlate.f gfortran -c -O2 -pipe crystal.f gfortran -c -O2 -pipe cspline.f gfortran -c -O2 -pipe cutoffs.f gfortran -c -O2 -pipe deflate.f gfortran -c -O2 -pipe delete.f gfortran -c -O2 -pipe diagq.f gfortran -c -O2 -pipe diffeq.f gfortran -c -O2 -pipe diffuse.f gfortran -c -O2 -pipe distgeom.f gfortran -c -O2 -pipe document.f gfortran -c -O2 -pipe dynamic.f gfortran -c -O2 -pipe eangang.f gfortran -c -O2 -pipe eangang1.f gfortran -c -O2 -pipe eangang2.f gfortran -c -O2 -pipe eangang3.f gfortran -c -O2 -pipe eangle.f gfortran -c -O2 -pipe eangle1.f gfortran -c -O2 -pipe eangle2.f gfortran -c -O2 -pipe eangle3.f gfortran -c -O2 -pipe ebond.f gfortran -c -O2 -pipe ebond1.f gfortran -c -O2 -pipe ebond2.f gfortran -c -O2 -pipe ebond3.f gfortran -c -O2 -pipe ebuck.f gfortran -c -O2 -pipe ebuck1.f gfortran -c -O2 -pipe ebuck2.f gfortran -c -O2 -pipe ebuck3.f gfortran -c -O2 -pipe echarge.f gfortran -c -O2 -pipe echarge1.f gfortran -c -O2 -pipe echarge2.f gfortran -c -O2 -pipe echarge3.f gfortran -c -O2 -pipe echgdpl.f gfortran -c -O2 -pipe echgdpl1.f gfortran -c -O2 -pipe echgdpl2.f gfortran -c -O2 -pipe echgdpl3.f gfortran -c -O2 -pipe edipole.f gfortran -c -O2 -pipe edipole1.f gfortran -c -O2 -pipe edipole2.f gfortran -c -O2 -pipe edipole3.f gfortran -c -O2 -pipe egauss.f gfortran -c -O2 -pipe egauss1.f gfortran -c -O2 -pipe egauss2.f gfortran -c -O2 -pipe egauss3.f gfortran -c -O2 -pipe egeom.f gfortran -c -O2 -pipe egeom1.f gfortran -c -O2 -pipe egeom2.f gfortran -c -O2 -pipe egeom3.f gfortran -c -O2 -pipe ehal.f gfortran -c -O2 -pipe ehal1.f gfortran -c -O2 -pipe ehal2.f gfortran -c -O2 -pipe ehal3.f gfortran -c -O2 -pipe eimprop.f gfortran -c -O2 -pipe eimprop1.f gfortran -c -O2 -pipe eimprop2.f gfortran -c -O2 -pipe eimprop3.f gfortran -c -O2 -pipe eimptor.f gfortran -c -O2 -pipe eimptor1.f gfortran -c -O2 -pipe eimptor2.f gfortran -c -O2 -pipe eimptor3.f gfortran -c -O2 -pipe elj.f gfortran -c -O2 -pipe elj1.f gfortran -c -O2 -pipe elj2.f gfortran -c -O2 -pipe elj3.f gfortran -c -O2 -pipe embed.f gfortran -c -O2 -pipe emetal.f gfortran -c -O2 -pipe emetal1.f gfortran -c -O2 -pipe emetal2.f gfortran -c -O2 -pipe emetal3.f gfortran -c -O2 -pipe emm3hb.f gfortran -c -O2 -pipe emm3hb1.f gfortran -c -O2 -pipe emm3hb2.f gfortran -c -O2 -pipe emm3hb3.f gfortran -c -O2 -pipe empole.f gfortran -c -O2 -pipe empole1.f gfortran -c -O2 -pipe empole2.f gfortran -c -O2 -pipe empole3.f gfortran -c -O2 -pipe energy.f gfortran -c -O2 -pipe eopbend.f gfortran -c -O2 -pipe eopbend1.f gfortran -c -O2 -pipe eopbend2.f gfortran -c -O2 -pipe eopbend3.f gfortran -c -O2 -pipe eopdist.f gfortran -c -O2 -pipe eopdist1.f gfortran -c -O2 -pipe eopdist2.f gfortran -c -O2 -pipe eopdist3.f gfortran -c -O2 -pipe epitors.f gfortran -c -O2 -pipe epitors1.f gfortran -c -O2 -pipe epitors2.f gfortran -c -O2 -pipe epitors3.f gfortran -c -O2 -pipe erf.f gfortran -c -O2 -pipe erxnfld.f gfortran -c -O2 -pipe erxnfld1.f gfortran -c -O2 -pipe erxnfld2.f gfortran -c -O2 -pipe erxnfld3.f gfortran -c -O2 -pipe esolv.f gfortran -c -O2 -pipe esolv1.f gfortran -c -O2 -pipe esolv2.f gfortran -c -O2 -pipe esolv3.f gfortran -c -O2 -pipe estrbnd.f gfortran -c -O2 -pipe estrbnd1.f gfortran -c -O2 -pipe estrbnd2.f gfortran -c -O2 -pipe estrbnd3.f gfortran -c -O2 -pipe estrtor.f gfortran -c -O2 -pipe estrtor1.f gfortran -c -O2 -pipe estrtor2.f gfortran -c -O2 -pipe estrtor3.f gfortran -c -O2 -pipe etors.f gfortran -c -O2 -pipe etors1.f gfortran -c -O2 -pipe etors2.f gfortran -c -O2 -pipe etors3.f gfortran -c -O2 -pipe etortor.f gfortran -c -O2 -pipe etortor1.f gfortran -c -O2 -pipe etortor2.f gfortran -c -O2 -pipe etortor3.f gfortran -c -O2 -pipe eurey.f gfortran -c -O2 -pipe eurey1.f gfortran -c -O2 -pipe eurey2.f gfortran -c -O2 -pipe eurey3.f gfortran -c -O2 -pipe evcorr.f gfortran -c -O2 -pipe extra.f gfortran -c -O2 -pipe extra1.f gfortran -c -O2 -pipe extra2.f gfortran -c -O2 -pipe extra3.f gfortran -c -O2 -pipe fatal.f gfortran -c -O2 -pipe fft3d.f gfortran -c -O2 -pipe fftpack.f gfortran -c -O2 -pipe field.f gfortran -c -O2 -pipe final.f gfortran -c -O2 -pipe flatten.f gfortran -c -O2 -pipe freeunit.f gfortran -c -O2 -pipe gda.f gfortran -c -O2 -pipe geometry.f gfortran -c -O2 -pipe getime.f gfortran -c -O2 -pipe getint.f gfortran -c -O2 -pipe getkey.f gfortran -c -O2 -pipe getmol2.f gfortran -c -O2 -pipe getnumb.f gfortran -c -O2 -pipe getpdb.f gfortran -c -O2 -pipe getprm.f gfortran -c -O2 -pipe getref.f gfortran -c -O2 -pipe getstring.f gfortran -c -O2 -pipe gettext.f gfortran -c -O2 -pipe getword.f gfortran -c -O2 -pipe getxyz.f gfortran -c -O2 -pipe gradient.f gfortran -c -O2 -pipe gradrgd.f gfortran -c -O2 -pipe gradrot.f gfortran -c -O2 -pipe groups.f gfortran -c -O2 -pipe grpline.f gfortran -c -O2 -pipe gyrate.f gfortran -c -O2 -pipe hessian.f gfortran -c -O2 -pipe hessrgd.f gfortran -c -O2 -pipe hessrot.f gfortran -c -O2 -pipe hybrid.f gfortran -c -O2 -pipe image.f gfortran -c -O2 -pipe impose.f gfortran -c -O2 -pipe induce.f gfortran -c -O2 -pipe inertia.f gfortran -c -O2 -pipe initial.f gfortran -c -O2 -pipe initprm.f gfortran -c -O2 -pipe initres.f gfortran -c -O2 -pipe initrot.f gfortran -c -O2 -pipe insert.f gfortran -c -O2 -pipe intedit.f gfortran -c -O2 -pipe intxyz.f gfortran -c -O2 -pipe invbeta.f gfortran -c -O2 -pipe invert.f gfortran -c -O2 -pipe jacobi.f gfortran -c -O2 -pipe kangang.f gfortran -c -O2 -pipe kangle.f gfortran -c -O2 -pipe katom.f gfortran -c -O2 -pipe kbond.f gfortran -c -O2 -pipe kcharge.f gfortran -c -O2 -pipe kdipole.f gfortran -c -O2 -pipe kewald.f gfortran -c -O2 -pipe kgeom.f gfortran -c -O2 -pipe kimprop.f gfortran -c -O2 -pipe kimptor.f gfortran -c -O2 -pipe kinetic.f gfortran -c -O2 -pipe kmetal.f gfortran -c -O2 -pipe kmpole.f gfortran -c -O2 -pipe kopbend.f gfortran -c -O2 -pipe kopdist.f gfortran -c -O2 -pipe korbit.f gfortran -c -O2 -pipe kpitors.f gfortran -c -O2 -pipe kpolar.f gfortran -c -O2 -pipe ksolv.f gfortran -c -O2 -pipe kstrbnd.f gfortran -c -O2 -pipe kstrtor.f gfortran -c -O2 -pipe ktors.f gfortran -c -O2 -pipe ktortor.f gfortran -c -O2 -pipe kurey.f gfortran -c -O2 -pipe kvdw.f gfortran -c -O2 -pipe lattice.f gfortran -c -O2 -pipe lbfgs.f gfortran -c -O2 -pipe lights.f gfortran -c -O2 -pipe makeint.f gfortran -c -O2 -pipe makepdb.f gfortran -c -O2 -pipe makeref.f gfortran -c -O2 -pipe makexyz.f gfortran -c -O2 -pipe maxwell.f gfortran -c -O2 -pipe mdinit.f gfortran -c -O2 -pipe mdrest.f gfortran -c -O2 -pipe mdsave.f gfortran -c -O2 -pipe mdstat.f gfortran -c -O2 -pipe mechanic.f gfortran -c -O2 -pipe merge.f gfortran -c -O2 -pipe minimize.f gfortran -c -O2 -pipe minirot.f gfortran -c -O2 -pipe minrigid.f gfortran -c -O2 -pipe molecule.f gfortran -c -O2 -pipe moments.f gfortran -c -O2 -pipe monte.f gfortran -c -O2 -pipe mutate.f gfortran -c -O2 -pipe nblist.f gfortran -c -O2 -pipe newton.f gfortran -c -O2 -pipe newtrot.f gfortran -c -O2 -pipe nextarg.f gfortran -c -O2 -pipe nexttext.f gfortran -c -O2 -pipe nspline.f gfortran -c -O2 -pipe nucleic.f gfortran -c -O2 -pipe number.f gfortran -c -O2 -pipe numeral.f gfortran -c -O2 -pipe numgrad.f gfortran -c -O2 -pipe ocvm.f gfortran -c -O2 -pipe openend.f gfortran -c -O2 -pipe optimize.f gfortran -c -O2 -pipe optirot.f gfortran -c -O2 -pipe optrigid.f gfortran -c -O2 -pipe optsave.f gfortran -c -O2 -pipe orbital.f gfortran -c -O2 -pipe orient.f gfortran -c -O2 -pipe orthog.f gfortran -c -O2 -pipe overlap.f gfortran -c -O2 -pipe path.f gfortran -c -O2 -pipe pdbxyz.f gfortran -c -O2 -pipe piscf.f gfortran -c -O2 -pipe pmepol.f i686-pc-linux-gnu-gcc -c -O2 -pipe -I/etc/java-config-2/current-system-vm/include -I/etc/java-config-2/current-system-vm/include/linux -I/usr/include -O2 -pipe pmpb.c gfortran -c -O2 -pipe polarize.f gfortran -c -O2 -pipe poledit.f gfortran -c -O2 -pipe polymer.f gfortran -c -O2 -pipe potential.f gfortran -c -O2 -pipe precise.f gfortran -c -O2 -pipe pressure.f gfortran -c -O2 -pipe prmedit.f gfortran -c -O2 -pipe prmkey.f gfortran -c -O2 -pipe promo.f gfortran -c -O2 -pipe protein.f gfortran -c -O2 -pipe prtdyn.f gfortran -c -O2 -pipe prterr.f gfortran -c -O2 -pipe prtint.f gfortran -c -O2 -pipe prtmol2.f gfortran -c -O2 -pipe prtpdb.f gfortran -c -O2 -pipe prtprm.f gfortran -c -O2 -pipe prtseq.f gfortran -c -O2 -pipe prtxyz.f gfortran -c -O2 -pipe pss.f gfortran -c -O2 -pipe pssrigid.f gfortran -c -O2 -pipe pssrot.f gfortran -c -O2 -pipe quatfit.f gfortran -c -O2 -pipe radial.f gfortran -c -O2 -pipe random.f gfortran -c -O2 -pipe rattle.f gfortran -c -O2 -pipe readdyn.f gfortran -c -O2 -pipe readgau.f gfortran -c -O2 -pipe readint.f gfortran -c -O2 -pipe readmol2.f gfortran -c -O2 -pipe readpdb.f gfortran -c -O2 -pipe readprm.f gfortran -c -O2 -pipe readseq.f gfortran -c -O2 -pipe readxyz.f gfortran -c -O2 -pipe replica.f gfortran -c -O2 -pipe rgdstep.f gfortran -c -O2 -pipe rings.f gfortran -c -O2 -pipe rmsfit.f gfortran -c -O2 -pipe rotlist.f gfortran -c -O2 -pipe rotpole.f gfortran -c -O2 -pipe saddle.f gfortran -c -O2 -pipe scan.f gfortran -c -O2 -pipe sdstep.f gfortran -c -O2 -pipe search.f i686-pc-linux-gnu-gcc -c -O2 -pipe -I/etc/java-config-2/current-system-vm/include -I/etc/java-config-2/current-system-vm/include/linux -I/usr/include -O2 -pipe server.c gfortran -c -O2 -pipe setime.f gfortran -c -O2 -pipe shakeup.f gfortran -c -O2 -pipe sigmoid.f gfortran -c -O2 -pipe sktstuff.f gfortran -c -O2 -pipe sniffer.f gfortran -c -O2 -pipe sort.f gfortran -c -O2 -pipe spacefill.f gfortran -c -O2 -pipe spectrum.f gfortran -c -O2 -pipe square.f gfortran -c -O2 -pipe suffix.f gfortran -c -O2 -pipe superpose.f gfortran -c -O2 -pipe surface.f gfortran -c -O2 -pipe surfatom.f gfortran -c -O2 -pipe switch.f gfortran -c -O2 -pipe sybylxyz.f gfortran -c -O2 -pipe temper.f gfortran -c -O2 -pipe testgrad.f gfortran -c -O2 -pipe testhess.f gfortran -c -O2 -pipe testpair.f gfortran -c -O2 -pipe testrot.f gfortran -c -O2 -pipe timer.f gfortran -c -O2 -pipe timerot.f gfortran -c -O2 -pipe tncg.f gfortran -c -O2 -pipe torphase.f gfortran -c -O2 -pipe torque.f gfortran -c -O2 -pipe torsions.f gfortran -c -O2 -pipe trimtext.f gfortran -c -O2 -pipe unitcell.f gfortran -c -O2 -pipe valence.f gfortran -c -O2 -pipe verlet.f gfortran -c -O2 -pipe version.f gfortran -c -O2 -pipe vibbig.f gfortran -c -O2 -pipe vibrate.f gfortran -c -O2 -pipe vibrot.f gfortran -c -O2 -pipe volume.f gfortran -c -O2 -pipe xtalfit.f gfortran -c -O2 -pipe xtalmin.f gfortran -c -O2 -pipe xyzatm.f gfortran -c -O2 -pipe xyzedit.f gfortran -c -O2 -pipe xyzint.f gfortran -c -O2 -pipe xyzpdb.f gfortran -c -O2 -pipe xyzsybyl.f gfortran -c -O2 -pipe zatom.f ar -crusv libtinker.a \ active.o \ analysis.o \ angles.o \ attach.o \ basefile.o \ beeman.o \ bicubic.o \ bitors.o \ bonds.o \ born.o \ bounds.o \ bspline.o \ calendar.o \ center.o \ chkpole.o \ chkring.o \ chkxyz.o \ cholesky.o \ clock.o \ cluster.o \ column.o \ command.o \ connect.o \ connolly.o \ control.o \ cspline.o \ cutoffs.o \ deflate.o \ delete.o \ diagq.o \ diffeq.o \ eangang.o \ eangang1.o \ eangang2.o \ eangang3.o \ eangle.o \ eangle1.o \ eangle2.o \ eangle3.o \ ebond.o \ ebond1.o \ ebond2.o \ ebond3.o \ ebuck.o \ ebuck1.o \ ebuck2.o \ ebuck3.o \ echarge.o \ echarge1.o \ echarge2.o \ echarge3.o \ echgdpl.o \ echgdpl1.o \ echgdpl2.o \ echgdpl3.o \ edipole.o \ edipole1.o \ edipole2.o \ edipole3.o \ egauss.o \ egauss1.o \ egauss2.o \ egauss3.o \ egeom.o \ egeom1.o \ egeom2.o \ egeom3.o \ ehal.o \ ehal1.o \ ehal2.o \ ehal3.o \ eimprop.o \ eimprop1.o \ eimprop2.o \ eimprop3.o \ eimptor.o \ eimptor1.o \ eimptor2.o \ eimptor3.o \ elj.o \ elj1.o \ elj2.o \ elj3.o \ embed.o \ emetal.o \ emetal1.o \ emetal2.o \ emetal3.o \ emm3hb.o \ emm3hb1.o \ emm3hb2.o \ emm3hb3.o \ empole.o \ empole1.o \ empole2.o \ empole3.o \ energy.o \ eopbend.o \ eopbend1.o \ eopbend2.o \ eopbend3.o \ eopdist.o \ eopdist1.o \ eopdist2.o \ eopdist3.o \ epitors.o \ epitors1.o \ epitors2.o \ epitors3.o \ erf.o \ erxnfld.o \ erxnfld1.o \ erxnfld2.o \ erxnfld3.o \ esolv.o \ esolv1.o \ esolv2.o \ esolv3.o \ estrbnd.o \ estrbnd1.o \ estrbnd2.o \ estrbnd3.o \ estrtor.o \ estrtor1.o \ estrtor2.o \ estrtor3.o \ etors.o \ etors1.o \ etors2.o \ etors3.o \ etortor.o \ etortor1.o \ etortor2.o \ etortor3.o \ eurey.o \ eurey1.o \ eurey2.o \ eurey3.o \ evcorr.o \ extra.o \ extra1.o \ extra2.o \ extra3.o \ fatal.o \ fft3d.o \ fftpack.o \ field.o \ final.o \ flatten.o \ freeunit.o \ geometry.o \ getime.o \ getint.o \ getkey.o \ getmol2.o \ getnumb.o \ getpdb.o \ getprm.o \ getref.o \ getstring.o \ gettext.o \ getword.o \ getxyz.o \ gradient.o \ gradrgd.o \ gradrot.o \ groups.o \ grpline.o \ gyrate.o \ hessian.o \ hessrgd.o \ hessrot.o \ hybrid.o \ image.o \ impose.o \ induce.o \ inertia.o \ initial.o \ initprm.o \ initres.o \ initrot.o \ insert.o \ invbeta.o \ invert.o \ jacobi.o \ kangang.o \ kangle.o \ katom.o \ kbond.o \ kcharge.o \ kdipole.o \ kewald.o \ kgeom.o \ kimprop.o \ kimptor.o \ kinetic.o \ kmetal.o \ kmpole.o \ kopbend.o \ kopdist.o \ korbit.o \ kpitors.o \ kpolar.o \ ksolv.o \ kstrbnd.o \ kstrtor.o \ ktors.o \ ktortor.o \ kurey.o \ kvdw.o \ lattice.o \ lbfgs.o \ lights.o \ makeint.o \ makepdb.o \ makeref.o \ makexyz.o \ maxwell.o \ mdinit.o \ mdrest.o \ mdsave.o \ mdstat.o \ mechanic.o \ merge.o \ molecule.o \ moments.o \ mutate.o \ nblist.o \ nextarg.o \ nexttext.o \ nspline.o \ number.o \ numeral.o \ numgrad.o \ ocvm.o \ openend.o \ optsave.o \ orbital.o \ orient.o \ orthog.o \ overlap.o \ piscf.o \ pmepol.o \ pmpb.o \ polymer.o \ precise.o \ pressure.o \ prmkey.o \ promo.o \ prtdyn.o \ prterr.o \ prtint.o \ prtmol2.o \ prtpdb.o \ prtprm.o \ prtseq.o \ prtxyz.o \ quatfit.o \ random.o \ rattle.o \ readdyn.o \ readgau.o \ readint.o \ readmol2.o \ readpdb.o \ readprm.o \ readseq.o \ readxyz.o \ replica.o \ rgdstep.o \ rings.o \ rmsfit.o \ rotlist.o \ rotpole.o \ sdstep.o \ search.o \ server.o \ setime.o \ shakeup.o \ sigmoid.o \ sktstuff.o \ sort.o \ square.o \ suffix.o \ surface.o \ surfatom.o \ switch.o \ temper.o \ testrot.o \ tncg.o \ torphase.o \ torque.o \ torsions.o \ trimtext.o \ unitcell.o \ verlet.o \ version.o \ volume.o \ xyzatm.o \ zatom.o a - active.o a - analysis.o a - angles.o a - attach.o a - basefile.o a - beeman.o a - bicubic.o a - bitors.o a - bonds.o a - born.o a - bounds.o a - bspline.o a - calendar.o a - center.o a - chkpole.o a - chkring.o a - chkxyz.o a - cholesky.o a - clock.o a - cluster.o a - column.o a - command.o a - connect.o a - connolly.o a - control.o a - cspline.o a - cutoffs.o a - deflate.o a - delete.o a - diagq.o a - diffeq.o a - eangang.o a - eangang1.o a - eangang2.o a - eangang3.o a - eangle.o a - eangle1.o a - eangle2.o a - eangle3.o a - ebond.o a - ebond1.o a - ebond2.o a - ebond3.o a - ebuck.o a - ebuck1.o a - ebuck2.o a - ebuck3.o a - echarge.o a - echarge1.o a - echarge2.o a - echarge3.o a - echgdpl.o a - echgdpl1.o a - echgdpl2.o a - echgdpl3.o a - edipole.o a - edipole1.o a - edipole2.o a - edipole3.o a - egauss.o a - egauss1.o a - egauss2.o a - egauss3.o a - egeom.o a - egeom1.o a - egeom2.o a - egeom3.o a - ehal.o a - ehal1.o a - ehal2.o a - ehal3.o a - eimprop.o a - eimprop1.o a - eimprop2.o a - eimprop3.o a - eimptor.o a - eimptor1.o a - eimptor2.o a - eimptor3.o a - elj.o a - elj1.o a - elj2.o a - elj3.o a - embed.o a - emetal.o a - emetal1.o a - emetal2.o a - emetal3.o a - emm3hb.o a - emm3hb1.o a - emm3hb2.o a - emm3hb3.o a - empole.o a - empole1.o a - empole2.o a - empole3.o a - energy.o a - eopbend.o a - eopbend1.o a - eopbend2.o a - eopbend3.o a - eopdist.o a - eopdist1.o a - eopdist2.o a - eopdist3.o a - epitors.o a - epitors1.o a - epitors2.o a - epitors3.o a - erf.o a - erxnfld.o a - erxnfld1.o a - erxnfld2.o a - erxnfld3.o a - esolv.o a - esolv1.o a - esolv2.o a - esolv3.o a - estrbnd.o a - estrbnd1.o a - estrbnd2.o a - estrbnd3.o a - estrtor.o a - estrtor1.o a - estrtor2.o a - estrtor3.o a - etors.o a - etors1.o a - etors2.o a - etors3.o a - etortor.o a - etortor1.o a - etortor2.o a - etortor3.o a - eurey.o a - eurey1.o a - eurey2.o a - eurey3.o a - evcorr.o a - extra.o a - extra1.o a - extra2.o a - extra3.o a - fatal.o a - fft3d.o a - fftpack.o a - field.o a - final.o a - flatten.o a - freeunit.o a - geometry.o a - getime.o a - getint.o a - getkey.o a - getmol2.o a - getnumb.o a - getpdb.o a - getprm.o a - getref.o a - getstring.o a - gettext.o a - getword.o a - getxyz.o a - gradient.o a - gradrgd.o a - gradrot.o a - groups.o a - grpline.o a - gyrate.o a - hessian.o a - hessrgd.o a - hessrot.o a - hybrid.o a - image.o a - impose.o a - induce.o a - inertia.o a - initial.o a - initprm.o a - initres.o a - initrot.o a - insert.o a - invbeta.o a - invert.o a - jacobi.o a - kangang.o a - kangle.o a - katom.o a - kbond.o a - kcharge.o a - kdipole.o a - kewald.o a - kgeom.o a - kimprop.o a - kimptor.o a - kinetic.o a - kmetal.o a - kmpole.o a - kopbend.o a - kopdist.o a - korbit.o a - kpitors.o a - kpolar.o a - ksolv.o a - kstrbnd.o a - kstrtor.o a - ktors.o a - ktortor.o a - kurey.o a - kvdw.o a - lattice.o a - lbfgs.o a - lights.o a - makeint.o a - makepdb.o a - makeref.o a - makexyz.o a - maxwell.o a - mdinit.o a - mdrest.o a - mdsave.o a - mdstat.o a - mechanic.o a - merge.o a - molecule.o a - moments.o a - mutate.o a - nblist.o a - nextarg.o a - nexttext.o a - nspline.o a - number.o a - numeral.o a - numgrad.o a - ocvm.o a - openend.o a - optsave.o a - orbital.o a - orient.o a - orthog.o a - overlap.o a - piscf.o a - pmepol.o a - pmpb.o a - polymer.o a - precise.o a - pressure.o a - prmkey.o a - promo.o a - prtdyn.o a - prterr.o a - prtint.o a - prtmol2.o a - prtpdb.o a - prtprm.o a - prtseq.o a - prtxyz.o a - quatfit.o a - random.o a - rattle.o a - readdyn.o a - readgau.o a - readint.o a - readmol2.o a - readpdb.o a - readprm.o a - readseq.o a - readxyz.o a - replica.o a - rgdstep.o a - rings.o a - rmsfit.o a - rotlist.o a - rotpole.o a - sdstep.o a - search.o a - server.o a - setime.o a - shakeup.o a - sigmoid.o a - sktstuff.o a - sort.o a - square.o a - suffix.o a - surface.o a - surfatom.o a - switch.o a - temper.o a - testrot.o a - tncg.o a - torphase.o a - torque.o a - torsions.o a - trimtext.o a - unitcell.o a - verlet.o a - version.o a - volume.o a - xyzatm.o a - zatom.o gfortran -Wl,-O1 -Wl,-rpath /opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -o alchemy.x alchemy.o libtinker.a -lmaloc -L/opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -ljvm gfortran -Wl,-O1 -Wl,-rpath /opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -o analyze.x analyze.o libtinker.a -lmaloc -L/opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -ljvm gfortran -Wl,-O1 -Wl,-rpath /opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -o anneal.x anneal.o libtinker.a -lmaloc -L/opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -ljvm gfortran -Wl,-O1 -Wl,-rpath /opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -o archive.x archive.o libtinker.a -lmaloc -L/opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -ljvm gfortran -Wl,-O1 -Wl,-rpath /opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -o correlate.x correlate.o libtinker.a -lmaloc -L/opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -ljvm gfortran -Wl,-O1 -Wl,-rpath /opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -o crystal.x crystal.o libtinker.a -lmaloc -L/opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -ljvm gfortran -Wl,-O1 -Wl,-rpath /opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -o diffuse.x diffuse.o libtinker.a -lmaloc -L/opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -ljvm gfortran -Wl,-O1 -Wl,-rpath /opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -o distgeom.x distgeom.o libtinker.a -lmaloc -L/opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -ljvm gfortran -Wl,-O1 -Wl,-rpath /opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -o document.x document.o libtinker.a -lmaloc -L/opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -ljvm gfortran -Wl,-O1 -Wl,-rpath /opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -o dynamic.x dynamic.o libtinker.a -lmaloc -L/opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -ljvm gfortran -Wl,-O1 -Wl,-rpath /opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -o gda.x gda.o libtinker.a -lmaloc -L/opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -ljvm gfortran -Wl,-O1 -Wl,-rpath /opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -o intedit.x intedit.o libtinker.a -lmaloc -L/opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -ljvm gfortran -Wl,-O1 -Wl,-rpath /opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -o intxyz.x intxyz.o libtinker.a -lmaloc -L/opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -ljvm gfortran -Wl,-O1 -Wl,-rpath /opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -o minimize.x minimize.o libtinker.a -lmaloc -L/opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -ljvm libtinker.a(pmpb.o): In function `apbsinitial_': pmpb.c:(.text+0xcab): undefined reference to `startVio' pmpb.c:(.text+0xd1a): undefined reference to `NOsh_ctor' pmpb.c:(.text+0xd8c): undefined reference to `NOsh_parseInput' libtinker.a(pmpb.o): In function `apbsempole_': pmpb.c:(.text+0xf89): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0xfa3): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0xfbd): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0xfdf): undefined reference to `Valist_dtor' pmpb.c:(.text+0x1035): undefined reference to `Vatom_setPosition' pmpb.c:(.text+0x106a): undefined reference to `Vatom_setDipole' pmpb.c:(.text+0x10d0): undefined reference to `Vatom_setQuadrupole' pmpb.c:(.text+0x1151): undefined reference to `Valist_getStatistics' pmpb.c:(.text+0x1178): undefined reference to `MGparm_check' pmpb.c:(.text+0x1188): undefined reference to `PBEparm_check' pmpb.c:(.text+0x1206): undefined reference to `initMG' pmpb.c:(.text+0x122c): undefined reference to `solveMG' pmpb.c:(.text+0x1251): undefined reference to `setPartMG' pmpb.c:(.text+0x1334): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x13d6): undefined reference to `Vgrid_ctor' pmpb.c:(.text+0x1431): undefined reference to `Vpmg_qfPermanentMultipoleEnergy' pmpb.c:(.text+0x1462): undefined reference to `Vpmg_fieldSpline4' pmpb.c:(.text+0x1517): undefined reference to `Vpmg_qfPermanentMultipoleForce' pmpb.c:(.text+0x1607): undefined reference to `Vpmg_dbPermanentMultipoleForce' pmpb.c:(.text+0x16a7): undefined reference to `Vpmg_ibPermanentMultipoleForce' pmpb.c:(.text+0x17f0): undefined reference to `killMG' pmpb.c:(.text+0x1830): undefined reference to `NOsh_setupElecCalc' pmpb.c:(.text+0x1848): undefined reference to `Valist_ctor' pmpb.c:(.text+0x18f0): undefined reference to `printPBEPARM' pmpb.c:(.text+0x1918): undefined reference to `printMGPARM' libtinker.a(pmpb.o): In function `apbsinduce_': pmpb.c:(.text+0x19bd): undefined reference to `Vatom_setInducedDipole' pmpb.c:(.text+0x1a3d): undefined reference to `MGparm_check' pmpb.c:(.text+0x1a53): undefined reference to `PBEparm_check' pmpb.c:(.text+0x1ad1): undefined reference to `initMG' pmpb.c:(.text+0x1af3): undefined reference to `solveMG' pmpb.c:(.text+0x1b14): undefined reference to `setPartMG' pmpb.c:(.text+0x1b97): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x1be9): undefined reference to `Vpmg_fieldSpline4' pmpb.c:(.text+0x1c93): undefined reference to `killMG' pmpb.c:(.text+0x1d75): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x1e11): undefined reference to `Vgrid_ctor' libtinker.a(pmpb.o): In function `apbsnlinduce_': pmpb.c:(.text+0x1f6d): undefined reference to `Vatom_setNLInducedDipole' pmpb.c:(.text+0x1fed): undefined reference to `MGparm_check' pmpb.c:(.text+0x2003): undefined reference to `PBEparm_check' pmpb.c:(.text+0x2081): undefined reference to `initMG' pmpb.c:(.text+0x20a3): undefined reference to `solveMG' pmpb.c:(.text+0x20c4): undefined reference to `setPartMG' pmpb.c:(.text+0x2147): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x2199): undefined reference to `Vpmg_fieldSpline4' pmpb.c:(.text+0x2243): undefined reference to `killMG' pmpb.c:(.text+0x2324): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x23c0): undefined reference to `Vgrid_ctor' libtinker.a(pmpb.o): In function `pbdirectpolforce_': pmpb.c:(.text+0x2514): undefined reference to `Vatom_setInducedDipole' pmpb.c:(.text+0x252b): undefined reference to `Vatom_setNLInducedDipole' pmpb.c:(.text+0x2644): undefined reference to `initMG' pmpb.c:(.text+0x26f0): undefined reference to `Vpmg_qfDirectPolForce' pmpb.c:(.text+0x2775): undefined reference to `Vpmg_qfNLDirectPolForce' pmpb.c:(.text+0x2863): undefined reference to `Vpmg_dbDirectPolForce' pmpb.c:(.text+0x28bc): undefined reference to `Vpmg_dbNLDirectPolForce' pmpb.c:(.text+0x2973): undefined reference to `Vpmg_ibDirectPolForce' pmpb.c:(.text+0x29cc): undefined reference to `Vpmg_ibNLDirectPolForce' pmpb.c:(.text+0x2acb): undefined reference to `killMG' libtinker.a(pmpb.o): In function `pbmutualpolforce_': pmpb.c:(.text+0x2bfa): undefined reference to `Vatom_setInducedDipole' pmpb.c:(.text+0x2c11): undefined reference to `Vatom_setNLInducedDipole' pmpb.c:(.text+0x2cf1): undefined reference to `initMG' pmpb.c:(.text+0x2d5f): undefined reference to `Vpmg_qfMutualPolForce' pmpb.c:(.text+0x2e2f): undefined reference to `Vpmg_dbMutualPolForce' pmpb.c:(.text+0x2ee7): undefined reference to `Vpmg_ibMutualPolForce' pmpb.c:(.text+0x2f93): undefined reference to `killMG' libtinker.a(pmpb.o): In function `apbsfinal_': pmpb.c:(.text+0x304c): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x3058): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x3064): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x3070): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x307c): undefined reference to `Vgrid_dtor' libtinker.a(pmpb.o):pmpb.c:(.text+0x3088): more undefined references to `Vgrid_dtor' follow libtinker.a(pmpb.o): In function `apbsfinal_': pmpb.c:(.text+0x3094): undefined reference to `Valist_dtor' pmpb.c:(.text+0x30a0): undefined reference to `NOsh_dtor' collect2: ld returned 1 exit status make: *** [intxyz.x] Error 1 make: *** Waiting for unfinished jobs.... libtinker.a(pmpb.o): In function `apbsinitial_': pmpb.c:(.text+0xcab): undefined reference to `startVio' pmpb.c:(.text+0xd1a): undefined reference to `NOsh_ctor' pmpb.c:(.text+0xd8c): undefined reference to `NOsh_parseInput' libtinker.a(pmpb.o): In function `apbsempole_': pmpb.c:(.text+0xf89): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0xfa3): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0xfbd): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0xfdf): undefined reference to `Valist_dtor' pmpb.c:(.text+0x1035): undefined reference to `Vatom_setPosition' pmpb.c:(.text+0x106a): undefined reference to `Vatom_setDipole' pmpb.c:(.text+0x10d0): undefined reference to `Vatom_setQuadrupole' pmpb.c:(.text+0x1151): undefined reference to `Valist_getStatistics' pmpb.c:(.text+0x1178): undefined reference to `MGparm_check' pmpb.c:(.text+0x1188): undefined reference to `PBEparm_check' pmpb.c:(.text+0x1206): undefined reference to `initMG' pmpb.c:(.text+0x122c): undefined reference to `solveMG' pmpb.c:(.text+0x1251): undefined reference to `setPartMG' pmpb.c:(.text+0x1334): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x13d6): undefined reference to `Vgrid_ctor' pmpb.c:(.text+0x1431): undefined reference to `Vpmg_qfPermanentMultipoleEnergy' pmpb.c:(.text+0x1462): undefined reference to `Vpmg_fieldSpline4' pmpb.c:(.text+0x1517): undefined reference to `Vpmg_qfPermanentMultipoleForce' pmpb.c:(.text+0x1607): undefined reference to `Vpmg_dbPermanentMultipoleForce' pmpb.c:(.text+0x16a7): undefined reference to `Vpmg_ibPermanentMultipoleForce' pmpb.c:(.text+0x17f0): undefined reference to `killMG' pmpb.c:(.text+0x1830): undefined reference to `NOsh_setupElecCalc' pmpb.c:(.text+0x1848): undefined reference to `Valist_ctor' pmpb.c:(.text+0x18f0): undefined reference to `printPBEPARM' pmpb.c:(.text+0x1918): undefined reference to `printMGPARM' libtinker.a(pmpb.o): In function `apbsinduce_': pmpb.c:(.text+0x19bd): undefined reference to `Vatom_setInducedDipole' pmpb.c:(.text+0x1a3d): undefined reference to `MGparm_check' pmpb.c:(.text+0x1a53): undefined reference to `PBEparm_check' pmpb.c:(.text+0x1ad1): undefined reference to `initMG' pmpb.c:(.text+0x1af3): undefined reference to `solveMG' pmpb.c:(.text+0x1b14): undefined reference to `setPartMG' pmpb.c:(.text+0x1b97): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x1be9): undefined reference to `Vpmg_fieldSpline4' pmpb.c:(.text+0x1c93): undefined reference to `killMG' pmpb.c:(.text+0x1d75): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x1e11): undefined reference to `Vgrid_ctor' libtinker.a(pmpb.o): In function `apbsnlinduce_': pmpb.c:(.text+0x1f6d): undefined reference to `Vatom_setNLInducedDipole' pmpb.c:(.text+0x1fed): undefined reference to `MGparm_check' pmpb.c:(.text+0x2003): undefined reference to `PBEparm_check' pmpb.c:(.text+0x2081): undefined reference to `initMG' pmpb.c:(.text+0x20a3): undefined reference to `solveMG' pmpb.c:(.text+0x20c4): undefined reference to `setPartMG' pmpb.c:(.text+0x2147): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x2199): undefined reference to `Vpmg_fieldSpline4' pmpb.c:(.text+0x2243): undefined reference to `killMG' pmpb.c:(.text+0x2324): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x23c0): undefined reference to `Vgrid_ctor' libtinker.a(pmpb.o): In function `pbdirectpolforce_': pmpb.c:(.text+0x2514): undefined reference to `Vatom_setInducedDipole' pmpb.c:(.text+0x252b): undefined reference to `Vatom_setNLInducedDipole' pmpb.c:(.text+0x2644): undefined libtinker.areference (topmpb.o )`:initMG 'In pmpb.cfunction: (`.apbsinitial_text'+:0x26f0 )pmpb.c:: (undefined. textreference+ 0xcabto) :` Vpmg_qfDirectPolForceundefined' referencepmpb.c :to( .`textstartVio+'0x2775 )pmpb.c:: (undefined. textreference+ 0xd1ato) :` Vpmg_qfNLDirectPolForceundefined' referencepmpb.c :to( .`textNOsh_ctor+'0x2863 )pmpb.c:: (undefined. textreference+ 0xd8cto) :` Vpmg_dbDirectPolForceundefined' referencepmpb.c :to( .`textNOsh_parseInput+'0x28bc )libtinker.a:( pmpb.oundefined): In function `apbsempole_': pmpb.c:(.text+0xf89): undefined reference to ` Vgrid_dtorreference' topmpb.c :`(Vpmg_dbNLDirectPolForce.'text +pmpb.c0xfa3:)(:. textundefined+ 0x2973reference) :to undefined` Vgrid_dtorreference' topmpb.c :`(Vpmg_ibDirectPolForce.'text +pmpb.c0xfbd:)(:. textundefined+ 0x29ccreference) :to undefined` Vgrid_dtorreference' topmpb.c :`(Vpmg_ibNLDirectPolForce.'text +pmpb.c0xfdf:)(:. textundefined+ 0x2acbreference) :to undefined` Valist_dtorreference' topmpb.c :`(killMG.'text +libtinker.a0x1035()pmpb.o:) :undefined Inreference functionto ``Vatom_setPosition'pbmutualpolforce_ 'pmpb.c:: (pmpb.c.:text(+.0x106atext)+:0x2bfa )undefined: undefinedreference referenceto to` Vatom_setDipole`'Vatom_setInducedDipole 'pmpb.c :pmpb.c(:.(text.+text0x10d0+)0x2c11:) :undefined undefinedreference referenceto to` Vatom_setQuadrupole`'Vatom_setNLInducedDipole 'pmpb.c :pmpb.c(:.(text.+text0x1151+)0x2cf1:) :undefined undefinedreference referenceto to` Valist_getStatistics`'initMG 'pmpb.c :pmpb.c(:.(text.+text0x1178+)0x2d5f:) :undefined undefinedreference referenceto to` MGparm_check`'Vpmg_qfMutualPolForce 'pmpb.c :pmpb.c(:.(text+.0x1188text)+:0x2e2f )undefined: referenceundefined toreference `toPBEparm_check '` Vpmg_dbMutualPolForcepmpb.c': (pmpb.c.:text(+.0x1206text)+:0x2ee7 )undefined: referenceundefined toreference `toinitMG '` Vpmg_ibMutualPolForcepmpb.c': (pmpb.c.:text(+.0x122ctext)+:0x2f93 )undefined: referenceundefined toreference `tosolveMG '` killMGpmpb.c': (libtinker.a.(textpmpb.o+)0x1251:) :In undefinedfunction reference` apbsfinal_to' :` setPartMGpmpb.c': (pmpb.c.:text(+.0x304ctext)+:0x1334 )undefined: referenceundefined toreference `toVgrid_dtor '` Vpmg_fillArraypmpb.c': (pmpb.c.:text(+.0x3058text)+:0x13d6 )undefined: referenceundefined toreference `toVgrid_dtor '` Vgrid_ctorpmpb.c': (pmpb.c.:text(+.0x3064text)+:0x1431 )undefined: referenceundefined toreference `toVgrid_dtor '` Vpmg_qfPermanentMultipoleEnergypmpb.c': (pmpb.c.:text(+.0x3070text)+:0x1462 )undefined: referenceundefined toreference `toVgrid_dtor '` Vpmg_fieldSpline4pmpb.c': (pmpb.c.:text(+.0x307ctext)+:0x1517 )undefined: referenceundefined toreference `toVgrid_dtor '` Vpmg_qfPermanentMultipoleForcelibtinker.a'( pmpb.opmpb.c)::(pmpb.c.:text(+.0x1607text)+:0x3088 )undefined: referencemore toundefined `referencesVpmg_dbPermanentMultipoleForce 'to pmpb.c`:Vgrid_dtor('. textfollow+ 0x16a7libtinker.a)(:pmpb.o )undefined: referenceIn tofunction ``Vpmg_ibPermanentMultipoleForceapbsfinal_'' :pmpb.c :pmpb.c(:.(text.+text0x17f0+)0x3094:) :undefined undefinedreference referenceto to` killMG`'Valist_dtor 'pmpb.c :pmpb.c(:.(text.+text0x1830+)0x30a0:) :undefined undefinedreference referenceto to` NOsh_setupElecCalc`'NOsh_dtor 'pmpb.c :(.text+0x1848): undefined reference to `Valist_ctor' pmpb.c:(.text+0x18f0): undefined reference to `printPBEPARM' pmpb.c:(.text+0x1918): undefined reference to `printMGPARM' libtinker.a(pmpb.o): In function `apbsinduce_': pmpb.c:(.text+0x19bd):collect2: undefined reference to `Vatom_setInducedDipole' pmpb.c:(ld returned 1 exit status.text +0x1a3d): undefined reference to `MGparm_check' pmpb.c:(.text+0x1a53): undefined reference to `PBEparm_check' pmpb.c:(.text+0x1ad1): undefined reference to `initMG' pmpb.c:(.text+0x1af3): undefined reference to `solveMG' pmpb.c:(.text+0x1b14): undefined reference to `setPartMG' pmpb.c:(.text+0x1b97): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x1be9): undefined reference to `Vpmg_fieldSpline4' pmpb.c:(.text+0x1c93): undefined reference to `killMG' pmpb.c:(.text+0x1d75): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x1e11): undefined reference to `Vgrid_ctor' libtinker.a(pmpb.o): In function `apbsnlinduce_': pmpb.c:(.text+0x1f6d): undefined reference to `Vatom_setNLInducedDipole' pmpb.c:(.text+0x1fed): undefined reference to `MGparm_check' pmpb.c:(.text+0x2003): undefined reference to `PBEparm_check' pmpb.c:(.text+0x2081): undefined reference to `initMG' pmpb.c:(.text+0x20a3): undefined reference to `solveMG' pmpb.c:(.text+0x20c4): undefined reference to `setPartMG' pmpb.c:(.text+0x2147): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x2199): undefined reference to `Vpmg_fieldSpline4' pmpb.c:(.text+0x2243): undefined reference to `killMG' pmpb.c:(.text+0x2324): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x23c0): undefined reference to `Vgrid_ctor' libtinker.a(pmpb.o): In function `pbdirectpolforce_': pmpb.c:(.text+0x2514): undefined reference to `Vatom_setInducedDipole' pmpb.c:(.text+0x252b): undefined reference to `Vatom_setNLInducedDipole' pmpb.c:(.text+0x2644): undefined reference to `initMG' pmpb.c:(.text+0x26f0): undefined reference to `Vpmg_qfDirectPolForce' pmpb.c:(.text+0x2775): undefined reference to `Vpmg_qfNLDirectPolForce' pmpb.c:(.text+0x2863): undefined reference to `Vpmg_dbDirectPolForce' pmpb.c:(.text+0x28bc): undefined reference to `Vpmg_dbNLDirectPolForce' pmpb.c:(.text+0x2973): undefined reference to `Vpmg_ibDirectPolForce' pmpb.c:(.text+0x29cc): undefined reference to `Vpmg_ibNLDirectPolForce' pmpb.c:(.text+0x2acb): undefined reference to `killMG' libtinker.a(pmpb.o): In function `pbmutualpolforce_': pmpb.c:(.text+0x2bfa): undefined reference to `Vatom_setInducedDipole' pmpb.c:(.text+0x2c11): undefined reference to `Vatom_setNLInducedDipole' pmpb.c:(.text+0x2cf1): undefined reference to `initMG' pmpb.c:(.text+0x2d5f): undefined reference to `Vpmg_qfMutualPolForce' pmpb.c:(.text+0x2e2f): undefined reference to `Vpmg_dbMutualPolForce' pmpb.c:(.text+0x2ee7): undefined reference to `Vpmg_ibMutualPolForce' pmpb.c:(.text+0x2f93): undefined reference to `killMG' libtinker.a(pmpb.o): In function `apbsfinal_': pmpb.c:(.text+0x304c): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x3058): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x3064): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x3070): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x307c): undefined reference to `Vgrid_dtor' libtinker.a(pmpb.o):pmpb.c:(.text+0x3088): more undefined references to `Vgrid_dtor' follow libtinker.a(pmpb.o): In function `apbsfinal_': pmpb.c:(.text+0x3094): undefined reference to `Valist_dtor' pmpb.c:(.text+0x30a0): undefined reference to `NOsh_dtor' collect2: ld returned 1 exit status make: *** [anneal.x] Error 1 make: *** [document.x] Error 1 libtinker.a(pmpb.o): In function `apbsinitial_': pmpb.c:(.text+0xcab): undefined reference to `startVio' pmpb.c:(.text+0xd1a): undefined reference to `NOsh_ctor' pmpb.c:(.text+0xd8c): undefined reference to `NOsh_parseInput' libtinker.a(pmpb.o): In function `apbsempole_': pmpb.c:(.text+0xf89): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0xfa3): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0xfbd): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0xfdf): undefined reference to `Valist_dtor' pmpb.c:(.text+0x1035): undefined reference to `Vatom_setPosition' pmpb.c:(.text+0x106a): undefined reference to `Vatom_setDipole' pmpb.c:(.text+0x10d0): undefined reference to `Vatom_setQuadrupole' pmpb.c:(.text+0x1151): undefined reference to `Valist_getStatistics' pmpb.c:(.text+0x1178): undefined reference to `MGparm_check' pmpb.c:(.text+0x1188): undefined reference to `PBEparm_check' pmpb.c:(.text+0x1206): undefined reference to `initMG' pmpb.c:(.text+0x122c): undefined reference to `solveMG' pmpb.c:(.text+0x1251): undefined reference to `setPartMG' pmpb.c:(.text+0x1334): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x13d6): undefined reference to `Vgrid_ctor' pmpb.c:(.text+0x1431): undefined reference to `Vpmg_qfPermanentMultipoleEnergy' pmpb.c:(.text+0x1462): undefined reference to `Vpmg_fieldSpline4' pmpb.c:(.text+0x1517): undefined reference to `Vpmg_qfPermanentMultipoleForce' pmpb.c:(.text+0x1607): undefined reference to `Vpmg_dbPermanentMultipoleForce' pmpb.c:(.text+0x16a7): undefined reference to `Vpmg_ibPermanentMultipoleForce' pmpb.c:(.text+0x17f0): undefined reference to `killMG' pmpb.c:(.text+0x1830): undefined reference to `NOsh_setupElecCalc' pmpb.c:(.text+0x1848): undefined reference to `Valist_ctor' pmpb.c:(.text+0x18f0): undefined reference to `printPBEPARM' pmpb.c:(.text+0x1918): undefined reference to `printMGPARM' libtinker.a(pmpb.o): In function `apbsinduce_': pmpb.c:(.text+0x19bd): undefined reference to `Vatom_setInducedDipole' pmpb.c:(.text+0x1a3d): undefined reference to `MGparm_check' pmpb.c:(.text+0x1a53): undefined reference to `PBEparm_check' pmpb.c:(.text+0x1ad1): undefined reference to `initMG' pmpb.c:(.text+0x1af3): undefined reference to `solveMG' pmpb.c:(.text+0x1b14): undefined reference to `setPartMG' pmpb.c:(.text+0x1b97): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x1be9): undefined reference to `Vpmg_fieldSpline4' pmpb.c:(.text+0x1c93): undefined reference to `killMG' pmpb.c:(.text+0x1d75): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x1e11): undefined reference to `Vgrid_ctor' libtinker.a(pmpb.o): In function `apbsnlinduce_': pmpb.c:(.text+0x1f6d): undefined reference to `Vatom_setNLInducedDipole' pmpb.c:(.text+0x1fed): undefined reference to `MGparm_check' pmpb.c:(.text+0x2003): undefined reference to `PBEparm_check' pmpb.c:(.text+0x2081): undefined reference to `initMG' pmpb.c:(.text+0x20a3): undefined reference to `solveMG' pmpb.c:(.text+0x20c4): undefined reference to `setPartMG' pmpb.c:(.text+0x2147): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x2199): undefined reference to `Vpmg_fieldSpline4' pmpb.c:(.text+0x2243): undefined reference to `killMG' pmpb.c:(.text+0x2324): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x23c0): undefined reference to `Vgrid_ctor' libtinker.a(pmpb.o): In function `pbdirectpolforce_': pmpb.c:(.text+0x2514): undefined reference to `Vatom_setInducedDipole' pmpb.c:(.text+0x252b): undefined reference to `Vatom_setNLInducedDipole' pmpb.c:(.text+0x2644): undefined reference to `initMG' pmpb.c:(.text+0x26f0): undefined reference to `Vpmg_qfDirectPolForce' pmpb.c:(.text+0x2775): undefined reference to `Vpmg_qfNLDirectPolForce' pmpb.c:(.text+0x2863): undefined reference to `Vpmg_dbDirectPolForce' pmpb.c:(.text+0x28bc): undefined reference to `Vpmg_dbNLDirectPolForce' pmpb.c:(.text+0x2973): undefined reference to `Vpmg_ibDirectPolForce' pmpb.c:(.text+0x29cc): undefined reference to `Vpmg_ibNLDirectPolForce' pmpb.c:(.text+0x2acb): undefined reference to `killMG' libtinker.a(pmpb.o): In function `pbmutualpolforce_': pmpb.c:(.text+0x2bfa): undefined reference to `Vatom_setInducedDipole' pmpb.c:(.text+0x2c11): undefined reference to `Vatom_setNLInducedDipole' pmpb.c:(.text+0x2cf1): undefined reference to `initMG' pmpb.c:(.text+0x2d5f): undefined reference to `Vpmg_qfMutualPolForce' pmpb.c:(.text+0x2e2f): undefined reference to `Vpmg_dbMutualPolForce' pmpb.c:(.text+0x2ee7): undefined reference to `Vpmg_ibMutualPolForce' pmpb.c:(.text+0x2f93): undefined reference to `killMG' libtinker.a(pmpb.o): In function `apbsfinal_': pmpb.c:(.text+0x304c): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x3058): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x3064): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x3070): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x307c): undefined reference to `Vgrid_dtor' libtinker.a(pmpb.o):pmpb.c:(.text+0x3088): more undefined references to `Vgrid_dtor' follow libtinker.a(pmpb.o): In function `apbsfinal_': pmpb.c:(.text+0x3094): undefined reference to `Valist_dtor' pmpb.c:(.text+0x30a0): undefined reference to `NOsh_dtor' collect2: ld returned 1 exit status make: *** [alchemy.x] Error 1 libtinker.a(pmpb.o): In function `apbsinitial_': pmpb.c:(.text+0xcab): undefined reference to `startVio' pmpb.c:(.text+0xd1a): undefined reference to `NOsh_ctor' pmpb.c:(.text+0xd8c): undefined reference to `NOsh_parseInput' libtinker.a(pmpb.o): In function `apbsempole_': pmpb.c:(.text+0xf89): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0xfa3): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0xfbd): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0xfdf): undefined reference to `Valist_dtor' pmpb.c:(.text+0x1035): undefined reference to `Vatom_setPosition' pmpb.c:(.text+0x106a): undefined reference to `Vatom_setDipole' pmpb.c:(.text+0x10d0): undefined reference to `Vatom_setQuadrupole' pmpb.c:(.text+0x1151): undefined reference to `Valist_getStatistics' pmpb.c:(.text+0x1178): undefined reference to `MGparm_check' pmpb.c:(.text+0x1188): undefined reference to `PBEparm_check' pmpb.c:(.text+0x1206): undefined reference to `initMG' pmpb.c:(.text+0x122c): undefined reference to `solveMG' pmpb.c:(.text+0x1251): undefined reference to `setPartMG' pmpb.c:(.text+0x1334): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x13d6): undefined reference to `Vgrid_ctor' pmpb.c:(.text+0x1431): undefined reference to `Vpmg_qfPermanentMultipoleEnergy' pmpb.c:(.text+0x1462): undefined reference to `Vpmg_fieldSpline4' pmpb.c:(.text+0x1517): undefined reference to `Vpmg_qfPermanentMultipoleForce' pmpb.c:(.text+0x1607): undefined reference to `Vpmg_dbPermanentMultipoleForce' pmpb.c:(.text+0x16a7): undefined reference to `Vpmg_ibPermanentMultipoleForce' pmpb.c:(.text+0x17f0): undefined reference to `killMG' pmpb.c:(.text+0x1830): undefined reference to `NOsh_setupElecCalc' pmpb.c:(.text+0x1848): undefined reference to `Valist_ctor' pmpb.c:(.text+0x18f0): undefined reference to `printPBEPARM' pmpb.c:(.text+0x1918): undefined reference to `printMGPARM' libtinker.a(pmpb.o): In function `apbsinduce_': pmpb.c:(.text+0x19bd): undefined reference to `Vatom_setInducedDipole' pmpb.c:(.text+0x1a3d): undefined reference to `MGparm_check' pmpb.c:(.text+0x1a53): undefined reference to `PBEparm_check' pmpb.c:(.text+0x1ad1): undefined reference to `initMG' pmpb.c:(.text+0x1af3): undefined reference to `solveMG' pmpb.c:(.text+0x1b14): undefined reference to `setPartMG' pmpb.c:(.text+0x1b97): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x1be9): undefined reference to `Vpmg_fieldSpline4' pmpb.c:(.text+0x1c93): undefined reference to `killMG' pmpb.c:(.text+0x1d75): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x1e11): undefined reference to `Vgrid_ctor' libtinker.a(pmpb.o): In function `apbsnlinduce_': pmpb.c:(.text+0x1f6d): undefined reference to `Vatom_setNLInducedDipole' pmpb.c:(.text+0x1fed): undefined reference to `MGparm_check' pmpb.c:(.text+0x2003): undefined reference to `PBEparm_check' pmpb.c:(.text+0x2081): undefined reference to `initMG' pmpb.c:(.text+0x20a3): undefined reference to `solveMG' pmpb.c:(.text+0x20c4): undefined reference to `setPartMG' pmpb.c:(.text+0x2147): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x2199): undefined reference to `Vpmg_fieldSpline4' pmpb.c:(.text+0x2243): undefined reference to `killMG' pmpb.c:(.text+0x2324): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x23c0): undefined reference to `Vgrid_ctor' libtinker.a(pmpb.o): In function `pbdirectpolforce_': pmpb.c:(.text+0x2514): undefined reference to `Vatom_setInducedDipole' pmpb.c:(.text+0x252b): undefined reference to `Vatom_setNLInducedDipole' pmpb.c:(.text+0x2644): undefined reference to `initMG' pmpb.c:(.text+0x26f0): undefined reference to `Vpmg_qfDirectPolForce' pmpb.c:(.text+0x2775): undefined reference to `Vpmg_qfNLDirectPolForce' pmpb.c:(.text+0x2863): undefined reference to `Vpmg_dbDirectPolForce' pmpb.c:(.text+0x28bc): undefined reference to `Vpmg_dbNLDirectPolForce' pmpb.c:(.text+0x2973): undefined reference to `Vpmg_ibDirectPolForce' pmpb.c:(.text+0x29cc): undefined reference to `Vpmg_ibNLDirectPolForce' pmpb.c:(.text+0x2acb): undefined reference to `killMG' libtinker.a(pmpb.o): In function `pbmutualpolforce_': pmpb.c:(.text+0x2bfa): undefined reference to `Vatom_setInducedDipole' pmpb.c:(.text+0x2c11): undefined reference to `Vatom_setNLInducedDipole' pmpb.c:(.text+0x2cf1): undefined reference to `initMG' pmpb.c:(.text+0x2d5f): undefined reference to `Vpmg_qfMutualPolForce' pmpb.c:(.text+0x2e2f): undefined reference to `Vpmg_dbMutualPolForce' pmpb.c:(.text+0x2ee7): undefined reference to `Vpmg_ibMutualPolForce' pmpb.c:(.text+0x2f93): undefined reference to `killMG' libtinker.a(pmpb.o): In function `apbsfinal_': pmpb.c:(.text+0x304c): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x3058): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x3064): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x3070): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x307c): undefined reference to `Vgrid_dtor' libtinker.a(pmpb.o):pmpb.c:(.text+0x3088): more undefined references to `Vgrid_dtor' follow libtinker.a(pmpb.o): In function `apbsfinal_': pmpb.c:(.text+0x3094): undefined reference to `Valist_dtor' pmpb.c:(.text+0x30a0): undefined reference to `NOsh_dtor' collect2: ld returned 1 exit status make: *** [diffuse.x] Error 1 libtinker.a(pmpb.o): In function `apbsinitial_': pmpb.c:(.text+0xcab): undefined reference to `startVio' pmpb.c:(.text+0xd1a): undefined reference to `NOsh_ctor' pmpb.c:(.text+0xd8c): undefined reference to `NOsh_parseInput' libtinker.a(pmpb.o): In function `apbsempole_': pmpb.c:(.text+0xf89): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0xfa3): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0xfbd): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0xfdf): undefined reference to `Valist_dtor' pmpb.c:(.text+0x1035): undefined reference to `Vatom_setPosition' pmpb.c:(.text+0x106a): undefined reference to `Vatom_setDipole' pmpb.c:(.text+0x10d0): undefined reference to `Vatom_setQuadrupole' pmpb.c:(.text+0x1151): undefined reference to `Valist_getStatistics' pmpb.c:(.text+0x1178): undefined reference to `MGparm_check' pmpb.c:(.text+0x1188): undefined reference to `PBEparm_check' pmpb.c:(.text+0x1206): undefined reference to `initMG' pmpb.c:(.text+0x122c): undefined reference to `solveMG' pmpb.c:(.text+0x1251): undefined reference to `setPartMG' pmpb.c:(.text+0x1334): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x13d6): undefined reference to `Vgrid_ctor' pmpb.c:(.text+0x1431): undefined reference to `Vpmg_qfPermanentMultipoleEnergy' pmpb.c:(.text+0x1462): undefined reference to `Vpmg_fieldSpline4' pmpb.c:(.text+0x1517): undefined reference to `Vpmg_qfPermanentMultipoleForce' pmpb.c:(.text+0x1607): undefined reference to `Vpmg_dbPermanentMultipoleForce' pmpb.c:(.text+0x16a7): undefined reference to `Vpmg_ibPermanentMultipoleForce' pmpb.c:(.text+0x17f0): undefined reference to `killMG' pmpb.c:(.text+0x1830): undefined reference to `NOsh_setupElecCalc' pmpb.c:(.text+0x1848): undefined reference to `Valist_ctor' pmpb.c:(.text+0x18f0): undefined reference to `printPBEPARM' pmpb.c:(.text+0x1918): undefined reference to `printMGPARM' libtinker.a(pmpb.o): In function `apbsinduce_': pmpb.c:(.text+0x19bd): undefined reference to `Vatom_setInducedDipole' pmpb.c:(.text+0x1a3d): undefined reference to `MGparm_check' pmpb.c:(.text+0x1a53): undefined reference to `PBEparm_check' pmpb.c:(.text+0x1ad1): undefined reference to `initMG' pmpb.c:(.text+0x1af3): undefined reference to `solveMG' pmpb.c:(.text+0x1b14): undefined reference to `setPartMG' pmpb.c:(.text+0x1b97): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x1be9): undefined reference to `Vpmg_fieldSpline4' pmpb.c:(.text+0x1c93): undefined reference to `killMG' pmpb.c:(.text+0x1d75): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x1e11): undefined reference to `Vgrid_ctor' libtinker.a(pmpb.o): In function `apbsnlinduce_': pmpb.c:(.text+0x1f6d): undefined reference to `Vatom_setNLInducedDipole' pmpb.c:(.text+0x1fed): undefined reference to `MGparm_check' pmpb.c:(.text+0x2003): undefined reference to `PBEparm_check' pmpb.c:(.text+0x2081): undefined reference to `initMG' pmpb.c:(.text+0x20a3): undefined reference to `solveMG' pmpb.c:(.text+0x20c4): undefined reference to `setPartMG' pmpb.c:(.text+0x2147): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x2199): undefined reference to `Vpmg_fieldSpline4' pmpb.c:(.text+0x2243): undefined reference to `killMG' pmpb.c:(.text+0x2324): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x23c0): undefined reference to `Vgrid_ctor' libtinker.a(pmpb.o): In function `pbdirectpolforce_': pmpb.c:(.text+0x2514): undefined reference to `Vatom_setInducedDipole' pmpb.c:(.text+0x252b): undefined reference to `Vatom_setNLInducedDipole' pmpb.c:(.text+0x2644): undefined reference to `initMG' pmpb.c:(.text+0x26f0): undefined reference to `Vpmg_qfDirectPolForce' pmpb.c:(.text+0x2775): undefined reference to `Vpmg_qfNLDirectPolForce' pmpb.c:(.text+0x2863): undefined reference to `Vpmg_dbDirectPolForce' pmpb.c:(.text+0x28bc): undefined reference to `Vpmg_dbNLDirectPolForce' pmpb.c:(.text+0x2973): undefined reference to `Vpmg_ibDirectPolForce' pmpb.c:(.text+0x29cc): undefined reference to `Vpmg_ibNLDirectPolForce' pmpb.c:(.text+0x2acb): undefined reference to `killMG' libtinker.a(pmpb.o): In function `pbmutualpolforce_': pmpb.c:(.text+0x2bfa): undefined reference to `Vatom_setInducedDipole' pmpb.c:(.text+0x2c11): undefined reference to `Vatom_setNLInducedDipole' pmpb.c:(.text+0x2cf1): undefined reference to `initMG' pmpb.c:(.text+0x2d5f): undefined reference to `Vpmg_qfMutualPolForce' pmpb.c:(.text+0x2e2f): undefined reference to `Vpmg_dbMutualPolForce' pmpb.c:(.text+0x2ee7): undefined reference to `Vpmg_ibMutualPolForce' pmpb.c:(.text+0x2f93): undefined reference to `killMG' libtinker.a(pmpb.o): In function `apbsfinal_': pmpb.c:(.text+0x304c): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x3058): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x3064): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x3070): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x307c): undefined reference to `Vgrid_dtor' libtinker.a(pmpb.o):pmpb.c:(.text+0x3088): more undefined references to `Vgrid_dtor' follow libtinker.a(pmpb.o): In function `apbsfinal_': pmpb.c:(.text+0x3094): undefined reference to `Valist_dtor' pmpb.c:(.text+0x30a0): undefined reference to `NOsh_dtor' collect2: ld returned 1 exit status libtinker.a(pmpb.o): In function `apbsinitial_': pmpb.c:(.text+0xcab): undefined reference to `startVio' pmpb.c:(.text+0xd1a): undefined reference to `NOsh_ctor' pmpb.c:(.text+0xd8c): undefined reference to `NOsh_parseInput' libtinker.a(pmpb.o): In function `apbsempole_': pmpb.c:(.text+0xf89): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0xfa3): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0xfbd): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0xfdf): undefined reference to `Valist_dtor' pmpb.c:(.text+0x1035): undefined reference to `Vatom_setPosition' pmpb.c:(.text+0x106a): undefined reference to `Vatom_setDipole' pmpb.c:(.text+0x10d0): undefined reference to `Vatom_setQuadrupole' pmpb.c:(.text+0x1151): undefined reference to `Valist_getStatistics' pmpb.c:(.text+0x1178): undefined reference to `MGparm_check' pmpb.c:(.text+0x1188): undefined reference to `PBEparm_check' pmpb.c:(.text+0x1206): undefined reference to `initMG' pmpb.c:(.text+0x122c): undefined reference to `solveMG' pmpb.c:(.text+0x1251): undefined reference to `setPartMG' pmpb.c:(.text+0x1334): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x13d6): undefined reference to `Vgrid_ctor' pmpb.c:(.text+0x1431): undefined reference to `Vpmg_qfPermanentMultipoleEnergy' pmpb.c:(.text+0x1462): undefined reference to `Vpmg_fieldSpline4' pmpb.c:(.text+0x1517): undefined reference to `Vpmg_qfPermanentMultipoleForce' pmpb.c:(.text+0x1607): undefined reference to `Vpmg_dbPermanentMultipoleForce' pmpb.c:(.text+0x16a7): undefined reference to `Vpmg_ibPermanentMultipoleForce' pmpb.c:(.text+0x17f0): undefined reference to `killMG' pmpb.c:(.text+0x1830): undefined reference to `NOsh_setupElecCalc' pmpb.c:(.text+0x1848): undefined reference to `Valist_ctor' pmpb.c:(.text+0x18f0): undefined reference to `printPBEPARM' pmpb.c:(.text+0x1918): undefined reference to `printMGPARM' libtinker.a(pmpb.o): In function `apbsinduce_': pmpb.c:(.text+0x19bd): undefined reference to `Vatom_setInducedDipole' pmpb.c:(.text+0x1a3d): undefined reference to `MGparm_check' pmpb.c:(.text+0x1a53): undefined reference to `PBEparm_check' pmpb.c:(.text+0x1ad1): undefined reference to `initMG' pmpb.c:(.text+0x1af3): undefined reference to `solveMG' pmpb.c:(.text+0x1b14): undefined reference to `setPartMG' pmpb.c:(.text+0x1b97): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x1be9): undefined reference to `Vpmg_fieldSpline4' pmpb.c:(.text+0x1c93): undefined reference to `killMG' pmpb.c:(.text+0x1d75): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x1e11): undefined reference to `Vgrid_ctor' libtinker.a(pmpb.o): In function `apbsnlinduce_': pmpb.c:(.text+0x1f6d): undefined reference to `Vatom_setNLInducedDipole' pmpb.c:(.text+0x1fed): undefined reference to `MGparm_check' pmpb.c:(.text+0x2003): undefined reference to `PBEparm_check' pmpb.c:(.text+0x2081): undefined reference to `initMG' pmpb.c:(.text+0x20a3): undefined make: *** [intedit.x] Error 1 reference to `solveMG' pmpb.c:(.text+0x20c4): undefined reference to `setPartMG' pmpb.c:(.text+0x2147): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x2199): undefined reference to `Vpmg_fieldSpline4' libtinker.apmpb.c:((.pmpb.otext)+:0x2243 )In: functionundefined `referenceapbsinitial_ 'to: `pmpb.ckillMG:'( .pmpb.ctext:+(0xcab.)text:+ 0x2324undefined) :reference undefinedto reference` startVioto' `pmpb.cVpmg_fillArray:'( .pmpb.ctext:+(0xd1a.)text:+ 0x23c0undefined) :reference undefinedto reference` NOsh_ctorto' `pmpb.cVgrid_ctor:'( .libtinker.atext(+pmpb.o0xd8c)):: Inundefined functionreference `topbdirectpolforce_ '`:NOsh_parseInput 'pmpb.c :libtinker.a((.pmpb.otext)+:0x2514 )In: functionundefined `referenceapbsempole_ 'to: `pmpb.cVatom_setInducedDipole:'( .pmpb.ctext:+(0xf89.)text:+ 0x252bundefined) :reference undefinedto reference` Vgrid_dtorto' `pmpb.cVatom_setNLInducedDipole:'( .pmpb.ctext:+(0xfa3.)text:+ 0x2644undefined) :reference undefinedto reference` Vgrid_dtorto' `pmpb.cinitMG:'( .pmpb.ctext:+(0xfbd.)text:+ 0x26f0undefined) :reference undefinedto reference` Vgrid_dtorto' `pmpb.cVpmg_qfDirectPolForce:'( .pmpb.ctext:+(0xfdf.)text:+ 0x2775undefined) : undefined referencereference toto ``Valist_dtorVpmg_qfNLDirectPolForce'' pmpb.cpmpb.c::((..texttext++0x10350x2863)):: undefinedundefined referencereference toto ``Vatom_setPositionVpmg_dbDirectPolForce'' pmpb.cpmpb.c::((..texttext++0x106a0x28bc)):: undefinedundefined referencereference toto ``Vatom_setDipoleVpmg_dbNLDirectPolForce' pmpb.c:(.text+0x2973): undefined reference to `Vpmg_ibDirectPolForce' pmpb.c:(.text+0x29cc): undefined reference to `Vpmg_ibNLDirectPolForce' pmpb.c:(.text+0x2acb): undefined reference to `killMG' libtinker.a(pmpb.o): In function `pbmutualpolforce_': pmpb.c:(.text+0x2bfa): undefined reference to `Vatom_setInducedDipole' pmpb.c:(.text+0x2c11): undefined reference to `Vatom_setNLInducedDipole' pmpb.c:(.text+0x2cf1): undefined reference to `initMG' pmpb.c:(.text+0x2d5f): undefined reference to `Vpmg_qfMutualPolForce' pmpb.c:(.text+0x2e2f): undefined reference to `Vpmg_dbMutualPolForce' pmpb.c:(.text+0x2ee7): undefined reference to `Vpmg_ibMutualPolForce' pmpb.c:(.text+0x2f93): undefined reference to `killMG' libtinker.a(pmpb.o): In function `apbsfinal_': pmpb.c:(.text+0x304c): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x3058): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x3064): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x3070): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x307c): undefined reference to `Vgrid_dtor' libtinker.a(pmpb.o):pmpb.c:(.text+0x3088): more undefined references to `Vgrid_dtor' follow libtinker.a(pmpb.o): In function `apbsfinal_': pmpb.c:(.text+0x3094): undefined reference to `Valist_dtor' pmpb.c:(.text+0x30a0): undefined reference to `NOsh_dtor' collect2: ld returned 1 exit status ' pmpb.c:(.text+0x10d0): undefined reference to `Vatom_setQuadrupole' pmpb.c:(.text+0x1151): undefined reference to `Valist_getStatistics' pmpb.c:(.text+0x1178): undefined reference to `MGparm_check' pmpb.c:(.text+0x1188): undefined reference to `PBEparm_check' pmpb.c:(.text+0x1206): undefined reference to `initMG' pmpb.c:(.text+0x122c): undefined reference to `solveMG' pmpb.c:(.text+0x1251): undefined reference to `setPartMG' pmpb.c:(.text+0x1334): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x13d6): undefined reference to `Vgrid_ctor' pmpb.c:(.text+0x1431): undefined reference to `Vpmg_qfPermanentMultipoleEnergy' pmpb.c:(.text+0x1462): undefined reference to `Vpmg_fieldSpline4' pmpb.c:(.text+0x1517): undefined reference to `Vpmg_qfPermanentMultipoleForce' pmpb.c:(.text+0x1607): undefined reference to `Vpmg_dbPermanentMultipoleForce' pmpb.c:(.text+0x16a7): undefined reference to `Vpmg_ibPermanentMultipoleForce' pmpb.c:(.text+0x17f0): undefined reference to `killMG' pmpb.c:(.text+0x1830): undefined reference to `NOsh_setupElecCalc' pmpb.c:(.text+0x1848): undefined reference to `Valist_ctor' pmpb.c:(.text+0x18f0): undefined reference to `printPBEPARM' pmpb.c:(.text+0x1918): undefined reference to `printMGPARM' libtinker.a(pmpb.o): In function `apbsinduce_': pmpb.c:(.text+0x19bd): undefined reference to `Vatom_setInducedDipole' pmpb.c:(.text+0x1a3d): undefined reference to `MGparm_check' pmpb.c:(.text+0x1a53): undefined reference to `PBEparm_check' pmpb.c:(.text+0x1ad1): undefined reference to `initMG' pmpb.c:(.text+0x1af3): undefined reference to `solveMG' pmpb.c:(.text+0x1b14): make: undefined reference to*** [dynamic.x] Error 1 `setPartMG' pmpb.c:(.text+0x1b97): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x1be9): undefined reference to `Vpmg_fieldSpline4' pmpb.c:(.text+0x1c93): undefined reference to `killMG' pmpb.c:(.text+0x1d75): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x1e11): undefined reference to `Vgrid_ctor' libtinker.a(pmpb.o): In function `apbsnlinduce_': pmpb.c:(.text+0x1f6d): undefined reference to `Vatom_setNLInducedDipole' pmpb.c:(.text+0x1fed): undefined reference to `MGparm_check' pmpb.c:(.text+0x2003): undefined reference to `PBEparm_check' pmpb.c:(.text+0x2081): undefined reference to `initMG' pmpb.c:(.text+0x20a3): undefined reference to `solveMG' pmpb.c:(.text+0x20c4): undefined reference to `setPartMG' pmpb.c:(.text+0x2147): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x2199): undefined reference to `Vpmg_fieldSpline4' pmpb.c:(.text+0x2243): undefined reference to `killMG' pmpb.c:(.text+0x2324): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x23c0): undefined reference to `Vgrid_ctor' libtinker.a(pmpb.o): In function `pbdirectpolforce_': pmpb.c:(.text+0x2514): undefined reference to `Vatom_setInducedDipole' pmpb.c:(.text+0x252b): undefined reference to `Vatom_setNLInducedDipole' pmpb.c:(.text+0x2644): undefined reference to `initMG' pmpb.c:(.text+0x26f0): undefined reference to `Vpmg_qfDirectPolForce' pmpb.c:(.text+0x2775): undefined reference to `Vpmg_qfNLDirectPolForce' pmpb.c:(.text+0x2863): undefined reference to `Vpmg_dbDirectPolForce' pmpb.c:(.text+0x28bc): undefined reference to `Vpmg_dbNLDirectPolForce' pmpb.c:(.text+0x2973): undefined reference to `Vpmg_ibDirectPolForce' pmpb.c:(.text+0x29cc): undefined reference to `Vpmg_ibNLDirectPolForce' pmpb.c:(.text+0x2acb): undefined reference to `killMG' libtinker.a(pmpb.o): In function `pbmutualpolforce_': pmpb.c:(.text+0x2bfa): undefined reference to `Vatom_setInducedDipole' pmpb.c:(.text+0x2c11): undefined reference to `Vatom_setNLInducedDipole' pmpb.c:(.text+0x2cf1): undefined reference to `initMG' pmpb.c:(.text+0x2d5f): undefined reference to `Vpmg_qfMutualPolForce' pmpb.c:(.text+0x2e2f): undefined reference to `Vpmg_dbMutualPolForce' pmpb.c:(.text+0x2ee7): undefined reference to `Vpmg_ibMutualPolForce' pmpb.c:(.text+0x2f93): undefined reference to `killMG' libtinker.a(pmpb.o): In function `apbsfinal_': pmpb.c:(.text+0x304c): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x3058): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x3064): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x3070): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x307c): undefined reference to `Vgrid_dtor' libtinker.a(pmpb.o):pmpb.c:(.text+0x3088): more undefined references to `Vgrid_dtor' follow libtinker.a(pmpb.o): In function `apbsfinal_': pmpb.c:(.text+0x3094): undefined reference to `Valist_dtor' pmpb.c:(.text+0x30a0): undefined reference to `NOsh_dtor' collect2: ld returned 1 exit status libtinker.a(pmpb.o): In function `apbsinitial_': pmpb.c:(.text+0xcab): undefined reference to `startVio' pmpb.c:(.text+0xd1a): undefined reference to `NOsh_ctor' pmpb.c:(.text+0xd8c): undefined reference to `NOsh_parseInput' libtinker.a(pmpb.o): In function `apbsempole_': pmpb.c:(.text+0xf89): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0xfa3): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0xfbd): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0xfdf): undefined reference to `Valist_dtor' pmpb.c:(.text+0x1035): undefined reference to `Vatom_setPosition' pmpb.c:(.text+0x106a): undefined reference to `Vatom_setDipole' pmpb.c:(.text+0x10d0): undefined reference to `Vatom_setQuadrupole' pmpb.c:(.text+0x1151): undefined reference to `Valist_getStatistics' pmpb.c:(.text+0x1178): undefined reference to `MGparm_check' pmpb.c:(.text+0x1188): undefined reference to `PBEparm_check' pmpb.c:(.text+0x1206): undefined reference to `initMG' pmpb.c:(.text+0x122c): undefined reference to `solveMG' pmpb.c:(.text+0x1251): undefined reference to `setPartMG' pmpb.c:(.text+0x1334): undefined reference tomake: `*** [distgeom.x] Error 1Vpmg_fillArray ' pmpb.c:(.text+0x13d6): undefined reference to `Vgrid_ctor' pmpb.c:(.text+0x1431): undefined reference to `Vpmg_qfPermanentMultipoleEnergy' pmpb.c:(.text+0x1462): undefined reference to `Vpmg_fieldSpline4' pmpb.c:(.text+0x1517): undefined reference to `Vpmg_qfPermanentMultipoleForce' pmpb.c:(.text+0x1607): undefined reference to `Vpmg_dbPermanentMultipoleForce' pmpb.c:(.text+0x16a7): undefined reference to `Vpmg_ibPermanentMultipoleForce' pmpb.c:(.text+0x17f0): undefined reference to `killMG' pmpb.c:(.text+0x1830): undefined reference to `NOsh_setupElecCalc' pmpb.c:(.text+0x1848): undefined reference to `Valist_ctor' pmpb.c:(.text+0x18f0): undefined reference to `printPBEPARM' pmpb.c:(.text+0x1918): undefined reference to `printMGPARM' libtinker.a(pmpb.o): In function `apbsinduce_': pmpb.c:(.text+0x19bd): undefined reference to `Vatom_setInducedDipole' pmpb.c:(.text+0x1a3d): undefined reference to `MGparm_check' pmpb.c:(.text+0x1a53): undefined reference to `PBEparm_check' pmpb.c:(.text+0x1ad1): undefined reference to `initMG' pmpb.c:(.text+0x1af3): undefined reference to `solveMG' pmpb.c:(.text+0x1b14): undefined reference to `setPartMG' pmpb.c:(.text+0x1b97): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x1be9): undefined reference to `Vpmg_fieldSpline4' pmpb.c:(.text+0x1c93): undefined reference to `killMG' pmpb.c:(.text+0x1d75): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x1e11): undefined reference to `Vgrid_ctor' libtinker.a(pmpb.o): In function `apbsnlinduce_': pmpb.c:(.text+0x1f6d): undefined reference to `Vatom_setNLInducedDipole' pmpb.c:(.text+0x1fed): undefined reference to `MGparm_check' pmpb.c:(.text+0x2003): undefined reference to `PBEparm_check' pmpb.c:(.text+0x2081): undefined reference to `initMG' pmpb.c:(.text+0x20a3): undefined reference to `solveMG' pmpb.c:(.text+0x20c4): undefined reference to `setPartMG' pmpb.c:(.text+0x2147): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x2199): undefined reference to `Vpmg_fieldSpline4' pmpb.c:(.text+0x2243): undefined reference to `killMG' pmpb.c:(.text+0x2324): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x23c0): undefined reference to `Vgrid_ctor' libtinker.a(pmpb.o): In function `pbdirectpolforce_': pmpb.c:(.text+0x2514): undefined reference to `Vatom_setInducedDipole' pmpb.c:(.text+0x252b): undefined reference to `Vatom_setNLInducedDipole' pmpb.c:(.text+0x2644): undefined reference to `initMG' pmpb.c:(.text+0x26f0): undefined reference to `Vpmg_qfDirectPolForce' pmpb.c:(.text+0x2775): undefined reference to `Vpmg_qfNLDirectPolForce' pmpb.c:(.text+0x2863): undefined reference to `Vpmg_dbDirectPolForce' pmpb.c:(.text+0x28bc): undefined reference to `Vpmg_dbNLDirectPolForce' pmpb.c:(.text+0x2973): undefined reference to `Vpmg_ibDirectPolForce' pmpb.c:(.text+0x29cc): undefined reference to `Vpmg_ibNLDirectPolForce' pmpb.c:(.text+0x2acb): undefined reference to `killMG' libtinker.a(pmpb.o): In function `pbmutualpolforce_': pmpb.c:(.text+0x2bfa): undefined reference to `Vatom_setInducedDipole' pmpb.c:(.text+0x2c11): undefined reference to `Vatom_setNLInducedDipole' pmpb.c:(.text+0x2cf1): undefined reference to `initMG' pmpb.c:(.text+0x2d5f): undefined reference to `Vpmg_qfMutualPolForce' pmpb.c:(.text+0x2e2f): undefined reference to `Vpmg_dbMutualPolForce' pmpb.c:(.text+0x2ee7): undefined reference to `Vpmg_ibMutualPolForce' pmpb.c:(.text+0x2f93): undefined reference to `killMG' libtinker.a(pmpb.o): In function `apbsfinal_': pmpb.c:(.text+0x304c): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x3058): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x3064): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x3070): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x307c): undefined referencelibtinker.a to( pmpb.o`)Vgrid_dtor:' Inlibtinker.a (functionpmpb.o )`:apbsinitial_pmpb.c'::( .pmpb.ctext:+(0x3088.)text:+ 0xcabmore) :undefined undefinedreferences referenceto to` Vgrid_dtor`'startVio 'follow pmpb.clibtinker.a:((pmpb.o.)text:+ 0xd1aIn) :function undefined` apbsfinal_reference' :to pmpb.c`:NOsh_ctor('. textpmpb.c+:0x3094().:text +undefined0xd8c )reference: toundefined `referenceValist_dtor 'to pmpb.c`:NOsh_parseInput('. textlibtinker.a+(0x30a0pmpb.o)):: undefinedIn referencefunction to` apbsempole_`'NOsh_dtor:' pmpb.c:(.text+0xf89): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0xfa3): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0xfbd): undefined reference collect2: to `Vgrid_dtor' pmpb.c:ld returned 1 exit status( .text+0xfdf): undefined reference to `Valist_dtor' pmpb.c:(.text+0x1035): undefined reference to `Vatom_setPosition' pmpb.c:(.text+0x106a): undefined reference to `Vatom_setDipole' pmpb.c:(.text+0x10d0): undefined reference to `Vatom_setQuadrupole' pmpb.c:(.text+0x1151):libtinker.a undefined (referencepmpb.o )to: `InValist_getStatistics 'function pmpb.c`:apbsinitial_('.:text +pmpb.c0x1178:)(:. textundefined+ 0xcabreference) :to undefined` MGparm_checkreference' topmpb.c :`(startVio.'text +pmpb.c0x1188:)(:. textundefined+ 0xd1areference): undefined toreference `toPBEparm_check '` NOsh_ctorpmpb.c': (pmpb.c.:text(+.0x1206text)+:0xd8c )undefined: referenceundefined toreference `toinitMG '` NOsh_parseInputpmpb.c': (libtinker.a.(textpmpb.o+)0x122c:) :In undefinedfunction reference` apbsempole_to' :` solveMGpmpb.c': (pmpb.c.:text(+.0xf89text)+:0x1251 )undefined: referenceundefined toreference `toVgrid_dtor '` setPartMGpmpb.c': (pmpb.c.:text(+.0xfa3text)+:0x1334 )undefined: referenceundefined toreference `toVgrid_dtor '` Vpmg_fillArraypmpb.c': (pmpb.c.:text(+.0xfbdtext)+:0x13d6 )undefined: referenceundefined toreference `toVgrid_dtor '` Vgrid_ctorpmpb.c': (pmpb.c.:text(+.0xfdftext)+:0x1431 )undefined: referenceundefined toreference `toValist_dtor '` Vpmg_qfPermanentMultipoleEnergypmpb.c': (pmpb.c.:text(+.0x1035text)+:0x1462 )undefined: referenceundefined toreference `toVatom_setPosition '` Vpmg_fieldSpline4pmpb.c': (pmpb.c.:text(+.0x106atext)+:0x1517 )undefined: referenceundefined toreference `toVatom_setDipole '` Vpmg_qfPermanentMultipoleForcepmpb.c': (pmpb.c.:text(+.0x10d0text)+:0x1607 )undefined: referenceundefined toreference `toVatom_setQuadrupole '` Vpmg_dbPermanentMultipoleForcepmpb.c': (pmpb.c.:text(+.0x1151text)+:0x16a7 )undefined: make: reference *** [analyze.x] Error 1undefined to reference` Valist_getStatisticsto' `pmpb.cVpmg_ibPermanentMultipoleForce:'( .pmpb.ctext:+(0x1178.)text:+ 0x17f0undefined) :reference undefinedto reference` MGparm_checkto' `pmpb.ckillMG:'( .pmpb.ctext:+(0x1188.)text:+ 0x1830undefined) :reference undefinedto reference` PBEparm_checkto' `pmpb.cNOsh_setupElecCalc:'( .text+0x1206): undefined reference to `initMG' pmpb.c:(.text+0x122c): undefined reference to `solveMG' pmpb.c:(.text+0x1251): undefined reference to `setPartMG' pmpb.c:(.text+0x1334): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x13d6): undefined reference to `Vgrid_ctor' pmpb.c:(.text+0x1431): undefined reference to `Vpmg_qfPermanentMultipoleEnergy' pmpb.c:(.text+0x1462): undefined reference to `Vpmg_fieldSpline4' pmpb.c:(.text+0x1517): undefined reference to `Vpmg_qfPermanentMultipoleForce' pmpb.c:(.text+0x1607): undefined reference to `Vpmg_dbPermanentMultipoleForce' pmpb.c:(.text+0x16a7): undefined reference to `Vpmg_ibPermanentMultipoleForce' pmpb.c:(.text+0x17f0): undefined reference to `killMG' pmpb.c:(.text+0x1830): undefined reference to `NOsh_setupElecCalc' pmpb.c:(.text+0x1848): undefined reference to `Valist_ctor' pmpb.c:(.text+0x18f0): undefined reference to `printPBEPARM' pmpb.c:(.text+0x1918): undefined reference to `printMGPARM' libtinker.a(pmpb.o): In function `apbsinduce_': pmpb.c:(.text+0x19bd): undefined reference to `Vatom_setInducedDipole' pmpb.c:(.text+0x1a3d): undefined reference to `MGparm_check' pmpb.c:(.text+0x1a53): undefined reference to `PBEparm_check' pmpb.c:(.text+0x1ad1): undefined reference to `initMG' pmpb.c:(.text+0x1af3): undefined reference to `solveMG' pmpb.c:(.text+0x1b14): undefined reference to `setPartMG' pmpb.c:(.text+0x1b97): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x1be9):pmpb.c :undefined( .referencetext +to0x1848 )`:Vpmg_fieldSpline4 'undefined pmpb.creference: (to. text`+Valist_ctor0x1c93') :pmpb.c :undefined( .referencetext +to0x18f0 )`:killMG 'undefined pmpb.creference: (to. `printPBEPARM'text +pmpb.c0x1d75:)(:. textundefined+ 0x1918reference) :to undefined` Vpmg_fillArrayreference' to `printMGPARM' libtinker.a(pmpb.o): In function `apbsinduce_': pmpb.c:(.text+0x19bd): undefined reference to `Vatom_setInducedDipole' pmpb.c:(.text+0x1a3d): undefined reference to `MGparm_check' pmpb.c:(.text+0x1a53): undefined reference to `PBEparm_check' pmpb.c:(.text+0x1ad1): undefined reference to `initMG' pmpb.c:(.text+0x1af3): undefined reference to `solveMG' pmpb.c:(.text+0x1b14): undefined reference to `setPartMG' pmpb.c:(.text+0x1b97): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x1be9): undefined reference to `Vpmg_fieldSpline4' pmpb.c:(.text+0x1c93): undefined reference to `killMG' pmpb.c:(.text+0x1d75): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x1e11): undefined reference to `Vgrid_ctor' libtinker.a(pmpb.o): In function `apbsnlinduce_': pmpb.c:(.text+0x1f6d): undefined reference pmpb.cto: (`.Vatom_setNLInducedDipoletext'+ 0x1e11pmpb.c)::( .undefinedtext +reference0x1fed )to: `undefinedVgrid_ctor 'reference libtinker.ato( pmpb.o`)MGparm_check:' Inpmpb.c :function( .`textapbsnlinduce_+'0x2003:) :pmpb.c :undefined( .referencetext +to0x1f6d )`:PBEparm_check 'undefined pmpb.creference: (to. text`+Vatom_setNLInducedDipole0x2081') :pmpb.c :undefined( .referencetext +to0x1fed )`initMG' pmpb.c:(.text+0x20a3): undefined reference to `solveMG' pmpb.c:: (undefined. textreference+ 0x20c4to) :` MGparm_checkundefined' pmpb.c:(.text+0x2003): undefined reference to `PBEparm_check' pmpb.c:(.text+0x2081): undefined reference to `initMG' pmpb.c:(.text+0x20a3): undefined reference to `solveMG' pmpb.c:(.text+0x20c4): undefined reference to `setPartMG' pmpb.c:(.text+0x2147): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x2199): undefined reference to `Vpmg_fieldSpline4' pmpb.c:(.text+0x2243): undefined reference to `killMG' pmpb.c:(.text+0x2324): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x23c0): undefined reference to `Vgrid_ctor' libtinker.a(pmpb.o): In function `pbdirectpolforce_': pmpb.c:(.text+0x2514): undefined reference to `Vatom_setInducedDipole' pmpb.c:(.text+0x252b): undefined reference to `Vatom_setNLInducedDipole' pmpb.c:(.text+0x2644): undefined reference to `initMG' pmpb.c:(.text+0x26f0): undefined reference to `Vpmg_qfDirectPolForce' pmpb.c:(.text+0x2775): undefined reference to `Vpmg_qfNLDirectPolForce' pmpb.c:(.text+0x2863): undefined reference to `Vpmg_dbDirectPolForce' pmpb.c:(.text+0x28bc): undefined reference to `Vpmg_dbNLDirectPolForce' pmpb.c:(.text+0x2973): undefined reference to `Vpmg_ibDirectPolForce' pmpb.c:(.text+0x29cc): undefined reference to `Vpmg_ibNLDirectPolForce' pmpb.c:(.text+0x2acb): undefined reference to `killMG' libtinker.a(pmpb.o): In function `pbmutualpolforce_': pmpb.c:(.text+0x2bfa): undefined reference to `Vatom_setInducedDipole' pmpb.c:(.text+0x2c11): undefined reference to `Vatom_setNLInducedDipole' pmpb.c:(.text+0x2cf1): undefined reference to `initMG' pmpb.c:(.text+0x2d5f): undefined reference to `Vpmg_qfMutualPolForce' pmpb.c:(.text+0x2e2f): undefined reference to `Vpmg_dbMutualPolForce' pmpb.c:(.text+0x2ee7): undefined reference to `Vpmg_ibMutualPolForce' pmpb.c:(.text+0x2f93): undefined reference to `killMG' libtinker.a(pmpb.o): In function `apbsfinal_': pmpb.c:(.text+0x304c): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x3058): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x3064): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x3070): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x307c): undefined reference to `Vgrid_dtor' libtinker.a(pmpb.o):pmpb.c:(.text+0x3088): more undefined references to `Vgrid_dtor' follow libtinker.a(pmpb.o): In function `apbsfinal_': pmpb.c:(.text+0x3094): undefined reference to `Valist_dtor' pmpb.c:(.text+0x30a0): undefined reference to `NOsh_dtor' collect2: ld returned 1 exit status reference to `setPartMG' pmpb.c:(.text+0x2147): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x2199): undefined reference to `Vpmg_fieldSpline4' pmpb.c:(.text+0x2243): undefined reference to `killMG' pmpb.c:(.text+0x2324): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x23c0): undefined reference to `Vgrid_ctor' libtinker.a(pmpb.o): In function `pbdirectpolforce_': pmpb.c:(.text+0x2514): undefined reference to `Vatom_setInducedDipole' pmpb.c:(.text+0x252b): undefined reference to `Vatom_setNLInducedDipole' pmpb.c:(.text+0x2644): undefined reference to `initMG' pmpb.c:(.text+0x26f0): undefined reference to `Vpmg_qfDirectPolForce' pmpb.c:(.text+0x2775): undefined reference to `Vpmg_qfNLDirectPolForce' pmpb.c:(.text+0x2863): undefined reference to `Vpmg_dbDirectPolForce' pmpb.c:(.text+0x28bc): undefined reference to `Vpmg_dbNLDirectPolForce' pmpb.c:(.text+0x2973): undefined reference to `Vpmg_ibDirectPolForce' pmpb.c:(.text+0x29cc): undefined reference to `Vpmg_ibNLDirectPolForce' pmpb.c:(.text+0x2acb): undefined reference to `killMG' libtinker.a(pmpb.o): In function `pbmutualpolforce_': pmpb.c:(.text+0x2bfa): undefined reference to `Vatom_setInducedDipole' pmpb.c:(.text+0x2c11): undefined reference to `Vatom_setNLInducedDipole' pmpb.c:(.text+0x2cf1): undefined reference to `initMG' pmpb.c:(.text+0x2d5f): undefined reference to `Vpmg_qfMutualPolForce' pmpb.c:(.text+0x2e2f): undefined reference to `Vpmg_dbMutualPolForce' pmpb.c:(.text+0x2ee7): undefined reference to `Vpmg_ibMutualPolForce' pmpb.c:(.text+0x2f93): undefined reference to `killMG' libtinker.a(pmpb.o): In function `apbsfinal_': pmpb.c:(.text+0x304c): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x3058): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x3064): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x3070): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x307c): undefined reference make: to *** [crystal.x] Error 1` Vgrid_dtor' libtinker.a(pmpb.o):pmpb.c:(.text+0x3088): more undefined references to `Vgrid_dtor' follow libtinker.a(pmpb.o): In function `apbsfinal_': pmpb.c:(.text+0x3094): undefined reference to `Valist_dtor' pmpb.c:(.text+0x30a0): undefined reference to `NOsh_dtor' collect2: ld returned 1 exit status libtinker.a(pmpb.o): In function `apbsinitial_': pmpb.c:(.text+0xcab): undefined reference to `startVio' pmpb.c:(.text+0xd1a): undefined reference to `NOsh_ctor' pmpb.c:(.text+0xd8c): undefined reference to `NOsh_parseInput' libtinker.a(pmpb.o): In function `apbsempole_': pmpb.c:(.text+0xf89): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0xfa3): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0xfbd): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0xfdf): undefined reference to `Valist_dtor' pmpb.c:(.text+0x1035): undefined reference to `Vatom_setPosition' pmpb.c:(.text+0x106a): undefined reference to `Vatom_setDipole' pmpb.c:(.text+0x10d0): undefined reference to `Vatom_setQuadrupole' pmpb.c:(.text+0x1151): undefined reference to `Valist_getStatistics' pmpb.c:(.text+0x1178): undefined reference to `MGparm_check' pmpb.c:(.text+0x1188): undefined reference to `PBEparm_check' pmpb.c:(.text+0x1206): undefined reference to `initMG' pmpb.c:(.text+0x122c): undefined reference to `solveMG' pmpb.c:(.text+0x1251): undefined reference to `setPartMG' pmpb.c:(.text+0x1334): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x13d6): undefined reference to `Vgrid_ctor' pmpb.c:(.text+0x1431): undefined reference to `Vpmg_qfPermanentMultipoleEnergy' pmpb.c:(.text+0x1462): undefined reference to `Vpmg_fieldSpline4' pmpb.c:(.text+0x1517): undefined reference to `Vpmg_qfPermanentMultipoleForce' pmpb.c:(.text+0x1607): undefined reference to `Vpmg_dbPermanentMultipoleForce' pmpb.c:(.text+0x16a7): undefined reference to `Vpmg_ibPermanentMultipoleForce' pmpb.c:(.text+0x17f0): undefined reference to `killMG' pmpb.c:(.text+0x1830): undefined reference to `NOsh_setupElecCalc' pmpb.c:(.text+0x1848): undefined reference to `Valist_ctor' pmpb.c:(.text+0x18f0): undefined reference to `printPBEPARM' pmpb.c:(.text+0x1918): undefined reference to `printMGPARM' libtinker.a(pmpb.o): In function `apbsinduce_': pmpb.c:(.text+0x19bd): undefined reference to `Vatom_setInducedDipole' make: *** [correlate.x] Error 1 pmpb.c:(.text+0x1a3d): undefined reference to `MGparm_check' pmpb.c:(.text+0x1a53): undefined reference to `PBEparm_check' pmpb.c:(.text+0x1ad1): undefined reference to `initMG' pmpb.c:(.text+0x1af3): undefined reference to `solveMG' pmpb.c:(.text+0x1b14): undefined reference to `setPartMG' pmpb.c:(.text+0x1b97): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x1be9): undefined reference to `Vpmg_fieldSpline4' pmpb.c:(.text+0x1c93): undefined reference to `killMG' pmpb.c:(.text+0x1d75): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x1e11): undefined reference to `Vgrid_ctor' libtinker.a(pmpb.o): In function `apbsnlinduce_': pmpb.c:(.text+0x1f6d): undefined reference to `Vatom_setNLInducedDipole' pmpb.c:(.text+0x1fed): undefined reference to `MGparm_check' pmpb.c:(.text+0x2003): undefined reference to `PBEparm_check' pmpb.c:(.text+0x2081): undefined reference to `initMG' pmpb.c:(.text+0x20a3): undefined reference to `solveMG' pmpb.c:(.text+0x20c4): undefined reference to `setPartMG' pmpb.c:(.text+0x2147): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x2199): undefined reference to `Vpmg_fieldSpline4' pmpb.c:(.libtinker.atext(+pmpb.o0x2243)):: Inundefined functionreference `toapbsinitial_ '`:killMG 'pmpb.c :pmpb.c(:.(text.+text0xcab+)0x2324:) :undefined undefinedreference referenceto to` startVio`'Vpmg_fillArray 'pmpb.c :pmpb.c(:.(text.+text0xd1a+)0x23c0:) :undefined undefinedreference referenceto to` NOsh_ctor`Vgrid_ctor'' libtinker.apmpb.c(:pmpb.o().:text +In0xd8c )function: `undefinedpbdirectpolforce_ 'reference: topmpb.c :`(NOsh_parseInput.'text +libtinker.a0x2514()pmpb.o:) :undefined Inreference functionto ``apbsempole_Vatom_setInducedDipole'': pmpb.cpmpb.c::((..texttext++0x252b0xf89)):: undefinedundefined referencereference toto ``Vatom_setNLInducedDipoleVgrid_dtor'' pmpb.cpmpb.c::((..texttext++0x26440xfa3)):: undefinedundefined referencereference toto ``initMGVgrid_dtor'' pmpb.cpmpb.c::((..texttext++0x26f00xfbd)):: undefinedundefined referencereference toto ``Vpmg_qfDirectPolForceVgrid_dtor'' pmpb.cpmpb.c::((..texttext++0x27750xfdf)):: undefinedundefined referencereference toto ``Vpmg_qfNLDirectPolForceValist_dtor'' pmpb.cpmpb.c::((..texttext++0x28630x1035)):: undefinedundefined referencereference toto ``Vpmg_dbDirectPolForceVatom_setPosition'' pmpb.cpmpb.c::((..texttext++0x28bc0x106a)):: undefinedundefined referencereference toto ``Vpmg_dbNLDirectPolForceVatom_setDipole'' pmpb.cpmpb.c::((..texttext++0x29730x10d0)):: undefinedundefined referencereference toto ``Vpmg_ibDirectPolForceVatom_setQuadrupole'' pmpb.cpmpb.c::((..texttext++0x29cc0x1151)):: undefinedundefined referencereference toto ``Vpmg_ibNLDirectPolForceValist_getStatistics'' pmpb.cpmpb.c::((..texttext++0x2acb0x1178)):: undefinedundefined referencereference toto ``killMGMGparm_check'' libtinker.apmpb.c(:pmpb.o().:text +In0x1188 )function `: pbmutualpolforce_undefined' :reference pmpb.cto: (`.PBEparm_checktext'+ 0x2bfapmpb.c)::( .undefinedtext +reference0x1206 )to: `undefinedVatom_setInducedDipole 'reference pmpb.cto: (`.initMGtext'+ 0x2c11pmpb.c)::( .undefinedtext +reference0x122c )to: `undefinedVatom_setNLInducedDipole 'reference pmpb.cto: (`.solveMGtext'+ 0x2cf1pmpb.c)::( .undefinedtext +reference0x1251 )to: undefined reference to `setPartMG' pmpb.c:(.text+0x1334): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x13d6): undefined reference to `Vgrid_ctor' pmpb.c:(.text+0x1431): undefined reference to `Vpmg_qfPermanentMultipoleEnergy' pmpb.c:(.text+0x1462): undefined reference to `Vpmg_fieldSpline4' pmpb.c:(.text+0x1517): undefined reference to `Vpmg_qfPermanentMultipoleForce' pmpb.c:(.text+0x1607): undefined reference to `Vpmg_dbPermanentMultipoleForce' pmpb.c:(.text+0x16a7): undefined reference to `Vpmg_ibPermanentMultipoleForce' pmpb.c:(.text+0x17f0): undefined reference to `killMG' pmpb.c:(.text+0x1830): undefined reference to `NOsh_setupElecCalc' pmpb.c:(.text+0x1848): undefined reference to `Valist_ctor' pmpb.c:(.text+0x18f0): undefined reference to `printPBEPARM' pmpb.c:(.text+0x1918): undefined reference to `printMGPARM' libtinker.a(pmpb.o): In function `apbsinduce_': pmpb.c:(.text+0x19bd): undefined reference to `Vatom_setInducedDipole' pmpb.c:(.text+0x1a3d): undefined reference to `MGparm_check' pmpb.c:(.text+0x1a53): undefined reference to `PBEparm_check' pmpb.c:(.text+0x1ad1): undefined reference to `initMG' pmpb.c:(.text+0x1af3): undefined reference to `solveMG' pmpb.c:(.text+0x1b14): undefined reference to `setPartMG' pmpb.c:(.text+0x1b97): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x1be9): undefined reference to `Vpmg_fieldSpline4' pmpb.c:(.text+0x1c93): undefined reference to `killMG' pmpb.c:(.text+0x1d75): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x1e11): undefined reference to `Vgrid_ctor' libtinker.a(pmpb.o): In function `apbsnlinduce_': pmpb.c:(.text+0x1f6d): undefined reference to `Vatom_setNLInducedDipole' pmpb.c:(.text+0x1fed): undefined reference to `MGparm_check' pmpb.c:(.text+0x2003): undefined reference to `PBEparm_check' pmpb.c:(.text+0x2081): undefined` reference toinitMG '` initMGpmpb.c': (pmpb.c.:text(+.0x2d5ftext)+:0x20a3 )undefined: referenceundefined toreference `toVpmg_qfMutualPolForce '` solveMGpmpb.c': (pmpb.c.:text(+.0x2e2ftext)+:0x20c4 )undefined: referenceundefined toreference `toVpmg_dbMutualPolForce '` setPartMGpmpb.c': (pmpb.c.:text(+.0x2ee7text)+:0x2147 )undefined: referenceundefined toreference `toVpmg_ibMutualPolForce '` Vpmg_fillArraypmpb.c': (pmpb.c.:text(+.0x2f93text)+:0x2199 )undefined: referenceundefined toreference `tokillMG '` Vpmg_fieldSpline4libtinker.a'( pmpb.opmpb.c)::( .Intext +function0x2243 )`:apbsfinal_ 'undefined: referencepmpb.c :to( .`textkillMG+'0x304c )pmpb.c:: (undefined. textreference+ 0x2324to) :` Vgrid_dtorundefined' referencepmpb.c :to( .`textVpmg_fillArray+'0x3058 )pmpb.c:: (undefined. textreference+ 0x23c0to) :` Vgrid_dtorundefined' referencepmpb.c :to( .`textVgrid_ctor+'0x3064 )libtinker.a:( pmpb.oundefined) :reference Into function` Vgrid_dtor`'pbdirectpolforce_ 'pmpb.c:: (pmpb.c.:text(+.0x3070text)+:0x2514 )undefined: referenceundefined toreference `toVgrid_dtor '` Vatom_setInducedDipolepmpb.c': (pmpb.c.:text(+.0x307ctext)+:0x252b )undefined: referenceundefined toreference `toVgrid_dtor '` Vatom_setNLInducedDipolelibtinker.a'( pmpb.opmpb.c)::(pmpb.c.:text(+.0x2644text)+:0x3088 )undefined: referencemore toundefined `referencesinitMG 'to pmpb.c`:Vgrid_dtor('. textfollow+ 0x26f0libtinker.a)(:pmpb.o )undefined: referenceIn tofunction ``Vpmg_qfDirectPolForceapbsfinal_'' :pmpb.c :pmpb.c(:.(text.+text0x2775+)0x3094:) :undefined undefinedreference referenceto to` Vpmg_qfNLDirectPolForce`'Valist_dtor 'pmpb.c :pmpb.c(:.(text.+text0x2863+)0x30a0:) :undefined undefinedreference referenceto `Vpmg_dbDirectPolForceto' `pmpb.cNOsh_dtor:'( .text+0x28bc): undefined reference to `Vpmg_dbNLDirectPolForce' pmpb.c:(.text+0x2973): undefined reference to `Vpmg_ibDirectPolForce' pmpb.c:(.text+0x29cc): undefined reference tocollect2: `Vpmg_ibNLDirectPolForce' pmpb.c:(.ld returned 1 exit statustext +0x2acb): undefined reference to `killMG' libtinker.a(pmpb.o): In function `pbmutualpolforce_': pmpb.c:(.text+0x2bfa): undefined reference to `Vatom_setInducedDipole' pmpb.c:(.text+0x2c11): undefined reference to `Vatom_setNLInducedDipole' pmpb.c:(.text+0x2cf1): undefined reference to `initMG' pmpb.c:(.text+0x2d5f): undefined reference to `Vpmg_qfMutualPolForce' pmpb.c:(.text+0x2e2f): undefined reference to `Vpmg_dbMutualPolForce' pmpb.c:(.text+0x2ee7): undefined reference to `Vpmg_ibMutualPolForce' pmpb.c:(.text+0x2f93): undefined reference to `killMG' libtinker.a(pmpb.o): In function `apbsfinal_': pmpb.c:(.text+0x304c): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x3058): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x3064): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x3070): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x307c): undefined reference to `Vgrid_dtor' libtinker.a(pmpb.o):pmpb.c:(.text+0x3088): more undefined references to `Vgrid_dtor' follow libtinker.a(pmpb.o): In function `apbsfinal_': pmpb.c:(.text+0x3094): undefined reference to `Valist_dtor' pmpb.c:(.text+0x30a0): undefined reference to `NOsh_dtor' collect2: ld returned 1 exit status make: *** [archive.x] Error 1 make: *** [minimize.x] Error 1 libtinker.a(pmpb.o): In function `apbsinitial_': pmpb.c:(.text+0xcab): undefined reference to `startVio' pmpb.c:(.text+0xd1a): undefined reference to `NOsh_ctor' pmpb.c:(.text+0xd8c): undefined reference to `NOsh_parseInput' libtinker.a(pmpb.o): In function `apbsempole_': pmpb.c:(.text+0xf89): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0xfa3): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0xfbd): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0xfdf): undefined reference to `Valist_dtor' pmpb.c:(.text+0x1035): undefined reference to `Vatom_setPosition' pmpb.c:(.text+0x106a): undefined reference to `Vatom_setDipole' pmpb.c:(.text+0x10d0): undefined reference to `Vatom_setQuadrupole' pmpb.c:(.text+0x1151): undefined reference to `Valist_getStatistics' pmpb.c:(.text+0x1178): undefined reference to `MGparm_check' pmpb.c:(.text+0x1188): undefined reference to `PBEparm_check' pmpb.c:(.text+0x1206): undefined reference to `initMG' pmpb.c:(.text+0x122c): undefined reference to `solveMG' pmpb.c:(.text+0x1251): undefined reference to `setPartMG' pmpb.c:(.text+0x1334): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x13d6): undefined reference to `Vgrid_ctor' pmpb.c:(.text+0x1431): undefined reference to `Vpmg_qfPermanentMultipoleEnergy' pmpb.c:(.text+0x1462): undefined reference to `Vpmg_fieldSpline4' pmpb.c:(.text+0x1517): undefined reference to `Vpmg_qfPermanentMultipoleForce' pmpb.c:(.text+0x1607): undefined reference to `Vpmg_dbPermanentMultipoleForce' pmpb.c:(.text+0x16a7): undefined reference to `Vpmg_ibPermanentMultipoleForce' pmpb.c:(.text+0x17f0): undefined reference to `killMG' pmpb.c:(.text+0x1830): undefined reference to `NOsh_setupElecCalc' pmpb.c:(.text+0x1848): undefined reference to `Valist_ctor' pmpb.c:(.text+0x18f0): undefined reference to `printPBEPARM' pmpb.c:(.text+0x1918): undefined reference to `printMGPARM' libtinker.a(pmpb.o): In function `apbsinduce_': pmpb.c:(.text+0x19bd): undefined reference to `Vatom_setInducedDipole' pmpb.c:(.text+0x1a3d): undefined reference to `MGparm_check' pmpb.c:(.text+0x1a53): undefined reference to `PBEparm_check' pmpb.c:(.text+0x1ad1): undefined reference to `initMG' pmpb.c:(.text+0x1af3): undefined reference to `solveMG' pmpb.c:(.text+0x1b14): undefined reference to `setPartMG' pmpb.c:(.text+0x1b97): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x1be9): undefined reference to `Vpmg_fieldSpline4' pmpb.c:(.text+0x1c93): undefined reference to `killMG' pmpb.c:(.text+0x1d75): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x1e11): undefined reference to `Vgrid_ctor' libtinker.a(pmpb.o): In function `apbsnlinduce_': pmpb.c:(.text+0x1f6d): undefined reference to `Vatom_setNLInducedDipole' pmpb.c:(.text+0x1fed): undefined reference to `MGparm_check' pmpb.c:(.text+0x2003): undefined reference to `PBEparm_check' pmpb.c:(.text+0x2081): undefined reference to `initMG' pmpb.c:(.text+0x20a3): undefined reference to `solveMG' pmpb.c:(.text+0x20c4): undefined reference to `setPartMG' pmpb.c:(.text+0x2147): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x2199): undefined reference to `Vpmg_fieldSpline4' pmpb.c:(.text+0x2243): undefined reference to `killMG' pmpb.c:(.text+0x2324): undefined reference to `Vpmg_fillArray' pmpb.c:(.text+0x23c0): undefined reference to `Vgrid_ctor' libtinker.a(pmpb.o): In function `pbdirectpolforce_': pmpb.c:(.text+0x2514): undefined reference to `Vatom_setInducedDipole' pmpb.c:(.text+0x252b): undefined reference to `Vatom_setNLInducedDipole' pmpb.c:(.text+0x2644): undefined reference to `initMG' pmpb.c:(.text+0x26f0): undefined reference to `Vpmg_qfDirectPolForce' pmpb.c:(.text+0x2775): undefined reference to `Vpmg_qfNLDirectPolForce' pmpb.c:(.text+0x2863): undefined reference to `Vpmg_dbDirectPolForce' pmpb.c:(.text+0x28bc): undefined reference to `Vpmg_dbNLDirectPolForce' pmpb.c:(.text+0x2973): undefined reference to `Vpmg_ibDirectPolForce' pmpb.c:(.text+0x29cc): undefined reference to `Vpmg_ibNLDirectPolForce' pmpb.c:(.text+0x2acb): undefined reference to `killMG' libtinker.a(pmpb.o): In function `pbmutualpolforce_': pmpb.c:(.text+0x2bfa): undefined reference to `Vatom_setInducedDipole' pmpb.c:(.text+0x2c11): undefined reference to `Vatom_setNLInducedDipole' pmpb.c:(.text+0x2cf1): undefined reference to `initMG' pmpb.c:(.text+0x2d5f): undefined reference to `Vpmg_qfMutualPolForce' pmpb.c:(.text+0x2e2f): undefined reference to `Vpmg_dbMutualPolForce' pmpb.c:(.text+0x2ee7): undefined reference to `Vpmg_ibMutualPolForce' pmpb.c:(.text+0x2f93): undefined reference to `killMG' libtinker.a(pmpb.o): In function `apbsfinal_': pmpb.c:(.text+0x304c): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x3058): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x3064): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x3070): undefined reference to `Vgrid_dtor' pmpb.c:(.text+0x307c): undefined reference to `Vgrid_dtor' libtinker.a(pmpb.o):pmpb.c:(.text+0x3088): more undefined references to `Vgrid_dtor' follow libtinker.a(pmpb.o): In function `apbsfinal_': pmpb.c:(.text+0x3094): undefined reference to `Valist_dtor' pmpb.c:(.text+0x30a0): undefined reference to `NOsh_dtor' collect2: ld returned 1 exit status make: *** [gda.x] Error 1 * ERROR: sci-chemistry/tinker-6.0 failed: * (no error message) * * Call stack: * ebuild.sh, line 54: Called src_compile * environment, line 4950: Called die * The specific snippet of code: * emake -f ../make/Makefile F77="${FORTRANC}" CC="$(tc-getCC) -c" F77FLAGS=-c OPTFLAGS="${FFLAGS}" LINKFLAGS="${LDFLAGS} -Wl,-rpath ${javalib}" INCLUDEDIR="$(java-pkg_get-jni-cflags) -I${EPREFIX}/usr/include" LIBS="$(pkg-config --libs apbs) -lmaloc -L${javalib} -ljvm" || die; * * If you need support, post the output of 'emerge --info =sci-chemistry/tinker-6.0', * the complete build log and the output of 'emerge -pqv =sci-chemistry/tinker-6.0'. !!! When you file a bug report, please include the following information: GENTOO_VM= CLASSPATH="" JAVA_HOME="/etc/java-config-2/current-system-vm" JAVACFLAGS="" COMPILER="" and of course, the output of emerge --info * The complete build log is located at '/var/log/portage/build/sci-chemistry/tinker-6.0:20100621-154430.log'. * The ebuild environment file is located at '/var/tmp/portage/sci-chemistry/tinker-6.0/temp/environment'. * S: '/var/tmp/portage/sci-chemistry/tinker-6.0/work/tinker/source'